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The map label for this gene is ulaR [H]

Identifier: 15602627

GI number: 15602627

Start: 898497

End: 899243

Strand: Reverse

Name: ulaR [H]

Synonym: PM0762

Alternate gene names: 15602627

Gene position: 899243-898497 (Counterclockwise)

Preceding gene: 15602628

Following gene: 15602626

Centisome position: 39.83

GC content: 38.02

Gene sequence:

>747_bases
ATGAACGAAAATTATCGACATAGACAATTACTGAATTTGTTAGAAGAAAGGAAAGCGCTATCAACGCAAGATATTATTCG
CTTATTGGATGTTTCACCTGCAACAGCAAGACGGGATATTACTAAATTAAATGAACAAGGGCGCTTAAAAAAAGTGCGTA
ATGGTGCGGAAGTCATTGAGAAAAAAGCATACCGTTCTCAACCGCTCGCCATCAATAATTCAGGTGAGAAAAAACGGATT
GCTGAATTAGCAGCCAAACTCTGTCAGGATGGCGATAGTGTGATTCTGACCTGTGGCTCTACAATGCTGATGTTAGGTAG
CCGTCTTTGTGGTAAGAATGTACAAATTATGACAAATTTCTTGCCATTAGCGAATTATCTCATTGAGCATGATCATAATG
ATGTAGTGATTATGGGGGGGCAATACAATAAAAATCAGGCTATTATGTTGTCTTTAAATACCAATGCAGAGGCTATTTAT
GCAGCGAATATCATGTTTACCAGTGGTAAAGGATTAACCGTAGATGGGCTATATAAAACCGATATGTTAATTGCGAACTC
TGAACAAAGAATGTTGCCACGTGTCGGTAAATTAGTTGTTCTATTAGATAGTTCAAAGCTTGGAAAACAAGCCGGTATGT
TATTTGCGGAACTGCACAATATTCATTTGTTAATCACAGGGAAAGAAGCGGACGCTGAGATTATTGCAGCATTAAAACGT
CAAGGGCTAAATGTGCTTTTAGCATAA

Upstream 100 bases:

>100_bases
CTTTAAGTTGTATTCTAACTATGTAAGCCACGTAATTTTACGTGGCTTATTTGTTCATTATTGATAGAATAGTTTCTAAG
CAACTAAGGACGTAAAAATA

Downstream 100 bases:

>100_bases
ATTTAAAGGTGCGAGATGACAACAAGAAACGCGGTATCTATAGCAGTCGTTCGTTGTATTCACTCTCAACGCGTTTATCG
TAAAGGAATGATTGTTATTG

Product: transcriptional repressor UlaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNENYRHRQLLNLLEERKALSTQDIIRLLDVSPATARRDITKLNEQGRLKKVRNGAEVIEKKAYRSQPLAINNSGEKKRI
AELAAKLCQDGDSVILTCGSTMLMLGSRLCGKNVQIMTNFLPLANYLIEHDHNDVVIMGGQYNKNQAIMLSLNTNAEAIY
AANIMFTSGKGLTVDGLYKTDMLIANSEQRMLPRVGKLVVLLDSSKLGKQAGMLFAELHNIHLLITGKEADAEIIAALKR
QGLNVLLA

Sequences:

>Translated_248_residues
MNENYRHRQLLNLLEERKALSTQDIIRLLDVSPATARRDITKLNEQGRLKKVRNGAEVIEKKAYRSQPLAINNSGEKKRI
AELAAKLCQDGDSVILTCGSTMLMLGSRLCGKNVQIMTNFLPLANYLIEHDHNDVVIMGGQYNKNQAIMLSLNTNAEAIY
AANIMFTSGKGLTVDGLYKTDMLIANSEQRMLPRVGKLVVLLDSSKLGKQAGMLFAELHNIHLLITGKEADAEIIAALKR
QGLNVLLA
>Mature_248_residues
MNENYRHRQLLNLLEERKALSTQDIIRLLDVSPATARRDITKLNEQGRLKKVRNGAEVIEKKAYRSQPLAINNSGEKKRI
AELAAKLCQDGDSVILTCGSTMLMLGSRLCGKNVQIMTNFLPLANYLIEHDHNDVVIMGGQYNKNQAIMLSLNTNAEAIY
AANIMFTSGKGLTVDGLYKTDMLIANSEQRMLPRVGKLVVLLDSSKLGKQAGMLFAELHNIHLLITGKEADAEIIAALKR
QGLNVLLA

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=249, Percent_Identity=53.8152610441767, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI87082344, Length=250, Percent_Identity=28.4, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789059, Length=255, Percent_Identity=27.0588235294118, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789519, Length=250, Percent_Identity=23.6, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790753, Length=252, Percent_Identity=25.7936507936508, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789829, Length=223, Percent_Identity=22.8699551569507, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI226510968, Length=253, Percent_Identity=24.5059288537549, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27455; Mature: 27455

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENYRHRQLLNLLEERKALSTQDIIRLLDVSPATARRDITKLNEQGRLKKVRNGAEVIE
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
KKAYRSQPLAINNSGEKKRIAELAAKLCQDGDSVILTCGSTMLMLGSRLCGKNVQIMTNF
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHH
LPLANYLIEHDHNDVVIMGGQYNKNQAIMLSLNTNAEAIYAANIMFTSGKGLTVDGLYKT
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEECCEEEE
DMLIANSEQRMLPRVGKLVVLLDSSKLGKQAGMLFAELHNIHLLITGKEADAEIIAALKR
EEEEECCHHHHHHCCCCEEEEECCCCCCHHHHHHHEECCCEEEEEECCCCCHHHHHHHHH
QGLNVLLA
CCCEEEEC
>Mature Secondary Structure
MNENYRHRQLLNLLEERKALSTQDIIRLLDVSPATARRDITKLNEQGRLKKVRNGAEVIE
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
KKAYRSQPLAINNSGEKKRIAELAAKLCQDGDSVILTCGSTMLMLGSRLCGKNVQIMTNF
HHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHH
LPLANYLIEHDHNDVVIMGGQYNKNQAIMLSLNTNAEAIYAANIMFTSGKGLTVDGLYKT
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEECCEEEE
DMLIANSEQRMLPRVGKLVVLLDSSKLGKQAGMLFAELHNIHLLITGKEADAEIIAALKR
EEEEECCHHHHHHCCCCEEEEECCCCCCHHHHHHHEECCCEEEEEECCCCCHHHHHHHHH
QGLNVLLA
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA