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The map label for this gene is ribE [H]

Identifier: 15602515

GI number: 15602515

Start: 752644

End: 753258

Strand: Reverse

Name: ribE [H]

Synonym: PM0650

Alternate gene names: 15602515

Gene position: 753258-752644 (Counterclockwise)

Preceding gene: 15602518

Following gene: 15602510

Centisome position: 33.37

GC content: 37.89

Gene sequence:

>615_bases
ATGTTTACAGGTATTGTTCAAGGAACTGCAAAAATTGTTTCTATTCAAGACAAAGCTAATTTTAGAACACAGATCGTGAA
AATGCCACAAGAAATGCTGAAAGGATTAGAAATTGGTGCTTCAGTTGCGAATAATGGCGTATGTTTGACGGTAACAGAGA
TTAATCAAGATTGTGTTAGTTTTGATTTAATGGCAGAAACATTACGTATTACAAATTTAGGCGAGTTACAGCCGGGTGAT
TTGGTGAATATTGAACGTGCGATGCAAATGGGCAGTGAAATTGGCGGGCATATTTTATCGGGGCATGTGTATTGTACGGC
GAGTGTGAAGCAGATTTTCAGTTCAGAAAATAATCGCCAGATTTGGTTCGAATTACCGGATATGGCAACAATGAAATATA
TTTTACCTAAAGGCTTTATTGCGATTGATGGAATTAGCTTAACCATTGGTGAAGTGAAAGGACAAACATTTTGCGTTAAT
TTGATTCCTGAAACGTTGAATCGTACCTTGATTGGCACGCGTGAAGTGGGGGATAAAGTGAATATTGAGATTGATCCACA
AACGCAAGCGATTGTGGATACAGTAGAGCGTTATTTGGGTACAAAACAGCAATAA

Upstream 100 bases:

>100_bases
TTTTTTTGCTTCCACTTTATAAGCACTAAAATCTATAAATTTCATAAAAATTCCGAGTTTGTTATAATAATAGAATATTG
AGTTTTAAAGAGAGATGACT

Downstream 100 bases:

>100_bases
TAAGACAAAATAAAAGTGCGGTGAAAATAAAGTGAATTTTCACCGCACTTTTTTATTGGCTTAATTTAAGTAATTAAAGA
CTTTGATGACTTTGTTAACA

Product: riboflavin synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFTGIVQGTAKIVSIQDKANFRTQIVKMPQEMLKGLEIGASVANNGVCLTVTEINQDCVSFDLMAETLRITNLGELQPGD
LVNIERAMQMGSEIGGHILSGHVYCTASVKQIFSSENNRQIWFELPDMATMKYILPKGFIAIDGISLTIGEVKGQTFCVN
LIPETLNRTLIGTREVGDKVNIEIDPQTQAIVDTVERYLGTKQQ

Sequences:

>Translated_204_residues
MFTGIVQGTAKIVSIQDKANFRTQIVKMPQEMLKGLEIGASVANNGVCLTVTEINQDCVSFDLMAETLRITNLGELQPGD
LVNIERAMQMGSEIGGHILSGHVYCTASVKQIFSSENNRQIWFELPDMATMKYILPKGFIAIDGISLTIGEVKGQTFCVN
LIPETLNRTLIGTREVGDKVNIEIDPQTQAIVDTVERYLGTKQQ
>Mature_204_residues
MFTGIVQGTAKIVSIQDKANFRTQIVKMPQEMLKGLEIGASVANNGVCLTVTEINQDCVSFDLMAETLRITNLGELQPGD
LVNIERAMQMGSEIGGHILSGHVYCTASVKQIFSSENNRQIWFELPDMATMKYILPKGFIAIDGISLTIGEVKGQTFCVN
LIPETLNRTLIGTREVGDKVNIEIDPQTQAIVDTVERYLGTKQQ

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyze

COG id: COG0307

COG function: function code H; Riboflavin synthase alpha chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 lumazine-binding repeats [H]

Homologues:

Organism=Escherichia coli, GI1787952, Length=203, Percent_Identity=66.9950738916256, Blast_Score=286, Evalue=5e-79,
Organism=Saccharomyces cerevisiae, GI6319733, Length=195, Percent_Identity=36.9230769230769, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001783
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00677 Lum_binding [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 22437; Mature: 22437

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00693 LUM_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGIVQGTAKIVSIQDKANFRTQIVKMPQEMLKGLEIGASVANNGVCLTVTEINQDCVS
CCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCHHH
FDLMAETLRITNLGELQPGDLVNIERAMQMGSEIGGHILSGHVYCTASVKQIFSSENNRQ
HHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCEEEECEEEEEHHHHHHHCCCCCCE
IWFELPDMATMKYILPKGFIAIDGISLTIGEVKGQTFCVNLIPETLNRTLIGTREVGDKV
EEEECCCHHHHHHHCCCCEEEECCEEEEEEECCCCEEEEEECHHHHCCCEEECHHCCCEE
NIEIDPQTQAIVDTVERYLGTKQQ
EEEECCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTGIVQGTAKIVSIQDKANFRTQIVKMPQEMLKGLEIGASVANNGVCLTVTEINQDCVS
CCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCHHH
FDLMAETLRITNLGELQPGDLVNIERAMQMGSEIGGHILSGHVYCTASVKQIFSSENNRQ
HHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCEEEECEEEEEHHHHHHHCCCCCCE
IWFELPDMATMKYILPKGFIAIDGISLTIGEVKGQTFCVNLIPETLNRTLIGTREVGDKV
EEEECCCHHHHHHHCCCCEEEECCEEEEEEECCCCEEEEEECHHHHCCCEEECHHCCCEE
NIEIDPQTQAIVDTVERYLGTKQQ
EEEECCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]