Click here to switch to the map view.

The map label for this gene is rsmI

Identifier: 15602510

GI number: 15602510

Start: 748349

End: 749194

Strand: Reverse

Name: rsmI

Synonym: PM0645

Alternate gene names: 15602510

Gene position: 749194-748349 (Counterclockwise)

Preceding gene: 15602515

Following gene: 15602507

Centisome position: 33.19

GC content: 41.84

Gene sequence:

>846_bases
ATGAACAATTTAACAGGAATTTTATATATTGTCGCCACGCCGATTGGGAATTTACAAGATATTACACAAAGGGCTTTAGC
GATTTTTGAACAGGTTGATCTGATTGCGGCGGAAGATACGCGTCATAGTGGTTTACTATTAAGCCATTATGGCATTAAGA
AGCCTTTTTTTGCTTTACATGATCATAATGAACAACAAAAAGCACACCTCTTAGTAGAGAAATTACAGCAGGGGCAACAT
ATTGCGTTGATTTCTGATGCGGGGACGCCACTGATTAGTGATCCCGGTTTTCATCTAGTACGTCAATGTCGCCAAGCTGG
TATTAAAGTGGTGCCGATACCGGGCGCTTGTGCTGCGGTTACCGCACTTTGCGCTTCAGGTATTGCATCCGATCGTTTTT
GTTTTGAAGGATTTTTACCGGCGAAAAGCAAGGCACGTTGCGATAAATTGCAAAATCTCGCTGAAGAAGAGCGTACGCTG
ATTTTTTATGAATCAACCCATCGCATTTTGGATACCTTAGCGGATATCGAAAAAACGTTGGGAGCAGAACGCTATGTGGT
ATTGGCGCGGGAAATTACCAAAACCTGGGAAACGATCGTAGGGGACAATGTGGCAAATTTACGCCAATGGTTAGGAGAAG
ATCCGAATCGCACTAAAGGAGAAATGGTGTTAATTATTGAAGGGAAAGTCAAACAGGAGACTGATGAGATAAATCCCCAA
GCCCTCAAAGCACTTGAATTAATAAGCCAATCGCTTCCATTAAAAAAGGCGGCTGCCATTGTGGCGGAAATCTATGGTTA
TAAGAAAAATGCGCTGTATCAATATGGATTAGAGCATTTTAATTAA

Upstream 100 bases:

>100_bases
GTGTGTTGTAATAGAATAGTCATGATTACTCCGTTTGTTAACAACAATAGAACGATCTTACTTATCTCATTAACTAAAAG
CAAATAAAAAGAAGTATGAA

Downstream 100 bases:

>100_bases
AGTTCTAGCTAAAAGCCCCATAGCAAGTAAATGCGCAGGGGCTTTTTAAAATCCTTTCAGTAGCACATTAATGGAAAGGC
TTGTGCTTCTGCCGTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNNLTGILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAHLLVEKLQQGQH
IALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKSKARCDKLQNLAEEERTL
IFYESTHRILDTLADIEKTLGAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQ
ALKALELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHFN

Sequences:

>Translated_281_residues
MNNLTGILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAHLLVEKLQQGQH
IALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKSKARCDKLQNLAEEERTL
IFYESTHRILDTLADIEKTLGAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQ
ALKALELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHFN
>Mature_281_residues
MNNLTGILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAHLLVEKLQQGQH
IALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKSKARCDKLQNLAEEERTL
IFYESTHRILDTLADIEKTLGAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQ
ALKALELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHFN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=277, Percent_Identity=67.5090252707581, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_PASMU (Q9CN04)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245582.1
- ProteinModelPortal:   Q9CN04
- SMR:   Q9CN04
- GeneID:   1243992
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0645
- NMPDR:   fig|272843.1.peg.645
- HOGENOM:   HBG529058
- OMA:   ASDRFCF
- ProtClustDB:   CLSK870184
- BioCyc:   PMUL272843:PM0645-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 31196; Mature: 31196

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLTGILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALH
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCEEEEC
DHNEQQKAHLLVEKLQQGQHIALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAV
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHH
TALCASGIASDRFCFEGFLPAKSKARCDKLQNLAEEERTLIFYESTHRILDTLADIEKTL
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHH
GAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCCHH
ALKALELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHFN
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNNLTGILYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALH
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCEEEEC
DHNEQQKAHLLVEKLQQGQHIALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAV
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHH
TALCASGIASDRFCFEGFLPAKSKARCDKLQNLAEEERTLIFYESTHRILDTLADIEKTL
HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHH
GAERYVVLAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCCHH
ALKALELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHFN
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100