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The map label for this gene is ypgC

Identifier: 15673503

GI number: 15673503

Start: 1562540

End: 1563070

Strand: Direct

Name: ypgC

Synonym: L162229

Alternate gene names: NA

Gene position: 1562540-1563070 (Clockwise)

Preceding gene: 15673498

Following gene: 15673508

Centisome position: 66.05

GC content: 31.64

Gene sequence:

>531_bases
ATGGCAGCGACAAACTATTCCCAAACTATCAAAAACGATACAAAAGATTTTATTACTACAGCAATTTTGCAACTATTAGG
AATTCAAAAAACATTTGAAAAACCGAAAAATCTTGCTCAACTCACGGTTTCAAACGTTTGTAAGAGGGCCGGAGTTAGCA
GAATGGCTTTTTATCGTAACTTTGAGTCCATTGACCAGGTCATTTATCAATACTATCAGCCTCAAATTTCTCAAAGTTTT
GAAATCATTCGTCAGAATGTTTCTGCCAGTTCAAAAATTGAAAACCAATTAAAATTCTTTGAAGAATTTAAAGATGACCT
CTTCCTTTCTGAAAGTCAAGGTTACGAACCAATTATTCGTCAGATTTATATTGAAGAAATTGAGAAATTTTATGAAAAGA
CAAATGACGAATATTTCATTACTTTTGTCGCAAATGGAGTTTATGCTCTTTGGCGTAAATGGTTAATGAACGGTCAAGAT
AAGTCAATTGAAGAAATACATGAACTCATTAGAAAAATTGTTACAATTTAA

Upstream 100 bases:

>100_bases
CATCTGTTACACTTGAAACTTATGTAAAATTATTGTACGATAGAAGTGTAAAAAATACAAGCCTTTGAAAAGCTTGTGTG
ACACAATCAGGAGAAGTGTA

Downstream 100 bases:

>100_bases
GTAAAAATAAAAAGACACTTGCACGTGTCTTTTTAATATAAATTTATTTTTTAAGCAATTTCCTGTCCTAAATGAATCAC
CTCATCCAAATAACTTTGAG

Product: transcription regulator

Products: NA

Alternate protein names: AcrR Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAATNYSQTIKNDTKDFITTAILQLLGIQKTFEKPKNLAQLTVSNVCKRAGVSRMAFYRNFESIDQVIYQYYQPQISQSF
EIIRQNVSASSKIENQLKFFEEFKDDLFLSESQGYEPIIRQIYIEEIEKFYEKTNDEYFITFVANGVYALWRKWLMNGQD
KSIEEIHELIRKIVTI

Sequences:

>Translated_176_residues
MAATNYSQTIKNDTKDFITTAILQLLGIQKTFEKPKNLAQLTVSNVCKRAGVSRMAFYRNFESIDQVIYQYYQPQISQSF
EIIRQNVSASSKIENQLKFFEEFKDDLFLSESQGYEPIIRQIYIEEIEKFYEKTNDEYFITFVANGVYALWRKWLMNGQD
KSIEEIHELIRKIVTI
>Mature_175_residues
AATNYSQTIKNDTKDFITTAILQLLGIQKTFEKPKNLAQLTVSNVCKRAGVSRMAFYRNFESIDQVIYQYYQPQISQSFE
IIRQNVSASSKIENQLKFFEEFKDDLFLSESQGYEPIIRQIYIEEIEKFYEKTNDEYFITFVANGVYALWRKWLMNGQDK
SIEEIHELIRKIVTI

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20803; Mature: 20672

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATNYSQTIKNDTKDFITTAILQLLGIQKTFEKPKNLAQLTVSNVCKRAGVSRMAFYRN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FESIDQVIYQYYQPQISQSFEIIRQNVSASSKIENQLKFFEEFKDDLFLSESQGYEPIIR
HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIYIEEIEKFYEKTNDEYFITFVANGVYALWRKWLMNGQDKSIEEIHELIRKIVTI
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AATNYSQTIKNDTKDFITTAILQLLGIQKTFEKPKNLAQLTVSNVCKRAGVSRMAFYRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FESIDQVIYQYYQPQISQSFEIIRQNVSASSKIENQLKFFEEFKDDLFLSESQGYEPIIR
HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIYIEEIEKFYEKTNDEYFITFVANGVYALWRKWLMNGQDKSIEEIHELIRKIVTI
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA