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The map label for this gene is yleF

Identifier: 15673115

GI number: 15673115

Start: 1147533

End: 1148384

Strand: Direct

Name: yleF

Synonym: L147291

Alternate gene names: 15673115

Gene position: 1147533-1148384 (Clockwise)

Preceding gene: 15673114

Following gene: 15673116

Centisome position: 48.51

GC content: 35.09

Gene sequence:

>852_bases
ATGGATACTTTACTTATCATTAGGCAAAATTATTCTAGCTTTACGACAGTTGAGAAAAAAATAGCTGACTATATTTTTGA
AGTCGGAGAGAAAATGCTAGAAAAAAGTGCGCAAGAAGTGGCTGGAGAAATTGGTAGCTCCTCTGCGGCTTTAGTAAGAT
TTTCCAGAAAGTTAGGTTATGATGGATTCTCCCAGTTTAAACAAAAATTGAGTGCCTCGTATGCTGCTCATGTAGATGAT
GAAGAATACTACAAGGAAGTAAATGATTCTGAATCACCTACTTCAATTAAGAATAAACTCAAAGTCCGGGTAAATCACAT
GGTAGAGACGACAAATTCTGCTCTGTTGGATGATGAAATCATGGAAGCTGTGTCTTCAATTGATGCTGCTGAGAATATCT
TTGTTTTTGGAATTGGAGCATCTTCAATGGTTGCTCAGGATATTTTTCAAAAGTTTAGTCGAATTGGCAAGCAAGTTATC
TTTATTCAAGATGCCCATTTATTTGTTTCCTCTCTTTCTGTTTCTAATAAAAAAACAATCTTCATTGGAATTTCAATGAA
GGGGGAAACAAAAGAAGTTCTGGAACTCGCAAGCGTGGTGAAAAATATGAAAATCCCCATTATTGCAATTACTTCTCGGG
AAAATTCAAGCTTAGGACAAATGGCTGATTGTATTCTTCATTCTGTTTCTGGTGAAGATTATCAAATGCGGACTGCTGCA
ACAATGAGTTTGATGGCTCAGCTTTATGTTGTTGACATTCTTTTTTATATGTATGTATCAGAGCATTTTACAGAAAGTTA
TGACAAGTTGGAAAAAACACGTGATGCTATAAAATTATTGGAAAAAAAGTGA

Upstream 100 bases:

>100_bases
ATAAGTAAAGGTCAAGAGATTATAACAGTAAAAGCATAAAAGTTAGAGGTTGGTTTATACCAACCTCTTTGTTATAATTA
AAGAAGAACGGAGAGGTTAA

Downstream 100 bases:

>100_bases
CAGGATTGAAATTTATTAATGATGAGTTGATTTCTGCAATTTTTTTCACAATATGATAAAATAGACCTTGTAAAAGATGG
ACTGAAGTCCAAAATTTAAG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDTLLIIRQNYSSFTTVEKKIADYIFEVGEKMLEKSAQEVAGEIGSSSAALVRFSRKLGYDGFSQFKQKLSASYAAHVDD
EEYYKEVNDSESPTSIKNKLKVRVNHMVETTNSALLDDEIMEAVSSIDAAENIFVFGIGASSMVAQDIFQKFSRIGKQVI
FIQDAHLFVSSLSVSNKKTIFIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILHSVSGEDYQMRTAA
TMSLMAQLYVVDILFYMYVSEHFTESYDKLEKTRDAIKLLEKK

Sequences:

>Translated_283_residues
MDTLLIIRQNYSSFTTVEKKIADYIFEVGEKMLEKSAQEVAGEIGSSSAALVRFSRKLGYDGFSQFKQKLSASYAAHVDD
EEYYKEVNDSESPTSIKNKLKVRVNHMVETTNSALLDDEIMEAVSSIDAAENIFVFGIGASSMVAQDIFQKFSRIGKQVI
FIQDAHLFVSSLSVSNKKTIFIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILHSVSGEDYQMRTAA
TMSLMAQLYVVDILFYMYVSEHFTESYDKLEKTRDAIKLLEKK
>Mature_283_residues
MDTLLIIRQNYSSFTTVEKKIADYIFEVGEKMLEKSAQEVAGEIGSSSAALVRFSRKLGYDGFSQFKQKLSASYAAHVDD
EEYYKEVNDSESPTSIKNKLKVRVNHMVETTNSALLDDEIMEAVSSIDAAENIFVFGIGASSMVAQDIFQKFSRIGKQVI
FIQDAHLFVSSLSVSNKKTIFIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILHSVSGEDYQMRTAA
TMSLMAQLYVVDILFYMYVSEHFTESYDKLEKTRDAIKLLEKK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI87082130, Length=283, Percent_Identity=26.5017667844523, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788767, Length=276, Percent_Identity=28.2608695652174, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1788159, Length=279, Percent_Identity=26.5232974910394, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082369, Length=267, Percent_Identity=23.2209737827715, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31714; Mature: 31714

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLIIRQNYSSFTTVEKKIADYIFEVGEKMLEKSAQEVAGEIGSSSAALVRFSRKLGY
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
DGFSQFKQKLSASYAAHVDDEEYYKEVNDSESPTSIKNKLKVRVNHMVETTNSALLDDEI
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
MEAVSSIDAAENIFVFGIGASSMVAQDIFQKFSRIGKQVIFIQDAHLFVSSLSVSNKKTI
HHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCEEE
FIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILHSVSGEDYQMRTAA
EEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHH
TMSLMAQLYVVDILFYMYVSEHFTESYDKLEKTRDAIKLLEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTLLIIRQNYSSFTTVEKKIADYIFEVGEKMLEKSAQEVAGEIGSSSAALVRFSRKLGY
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
DGFSQFKQKLSASYAAHVDDEEYYKEVNDSESPTSIKNKLKVRVNHMVETTNSALLDDEI
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
MEAVSSIDAAENIFVFGIGASSMVAQDIFQKFSRIGKQVIFIQDAHLFVSSLSVSNKKTI
HHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCEEE
FIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILHSVSGEDYQMRTAA
EEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHH
TMSLMAQLYVVDILFYMYVSEHFTESYDKLEKTRDAIKLLEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]