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The map label for this gene is ybgD

Identifier: 15672146

GI number: 15672146

Start: 167099

End: 167701

Strand: Direct

Name: ybgD

Synonym: L167097

Alternate gene names: 15672146

Gene position: 167099-167701 (Clockwise)

Preceding gene: 15672145

Following gene: 30023976

Centisome position: 7.06

GC content: 36.15

Gene sequence:

>603_bases
ATGGAATTTGACGAATTAATCAAGCGATTAAATGCAGTTGCTGATGCAGGACTTTTTTACGGGAAAGATGTCTTTGATAT
TGAACGTTATCATGAAATCAAAGCGATTTTACCTCAACTTTTAAAGCATTCAACTACTTTGACTAAAGAGGAGCTGACAG
ATCTCTTTCGTCCAAATAATTCTTATCCGACACCGATGATTGATGTGCGGGCTTTTATTCAAAATGAAGAAAAAGAGATA
CTCTTTGTTCGGGATAAAATGCAGGGAGACTGGGCCTTACCAGGTGGATATGGAGAGATTGGATTTACGCCAAGTGAAAA
TCTACTTAAGGAGTTGAAAGAGGAAGCTGGAGTTTCTGGAGAGATTGAGCGCTTATTAGCGATTTTCGATACAGACAAAT
GCCAACCGCAAGGAAAGCAATATTATAAATTTGTTTTTAAGTGTAAAGCTTTATCCATTGATTTTCTGGAAAATAGTGAA
ACTTCAGAAACGAAATTTATAAAACGCTCAGAGCTGACAAACTTGTCAGTAAAAAGAACGACCATGTCACAACTTAGTTT
GCTTGAAAAATTGTCAAAAACCGGAAAACAATATATTGACTAG

Upstream 100 bases:

>100_bases
TAAACGTTACGATGAAGAAACGATTTATAAAGTAGCGGCTGCTTTTGAAGCAACTACTGATTTCCACAAAAAACAACCGA
TTATTTTTGGAAAATAAAAA

Downstream 100 bases:

>100_bases
GATAATTTGACTTTCTTAAAGAAAGTATCGGAGAAAATAATGAACTTTGAAACAGTAATTGGGCTTGAAGTCCACGTTGA
GTTAAGTACAAACTCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHSTTLTKEELTDLFRPNNSYPTPMIDVRAFIQNEEKEI
LFVRDKMQGDWALPGGYGEIGFTPSENLLKELKEEAGVSGEIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSE
TSETKFIKRSELTNLSVKRTTMSQLSLLEKLSKTGKQYID

Sequences:

>Translated_200_residues
MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHSTTLTKEELTDLFRPNNSYPTPMIDVRAFIQNEEKEI
LFVRDKMQGDWALPGGYGEIGFTPSENLLKELKEEAGVSGEIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSE
TSETKFIKRSELTNLSVKRTTMSQLSLLEKLSKTGKQYID
>Mature_200_residues
MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHSTTLTKEELTDLFRPNNSYPTPMIDVRAFIQNEEKEI
LFVRDKMQGDWALPGGYGEIGFTPSENLLKELKEEAGVSGEIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSE
TSETKFIKRSELTNLSVKRTTMSQLSLLEKLSKTGKQYID

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23035; Mature: 23035

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHSTTLTKEELTDLFRPNN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
SYPTPMIDVRAFIQNEEKEILFVRDKMQGDWALPGGYGEIGFTPSENLLKELKEEAGVSG
CCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
EIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSETSETKFIKRSELTNLSVKRT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCHHHHH
TMSQLSLLEKLSKTGKQYID
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHSTTLTKEELTDLFRPNN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
SYPTPMIDVRAFIQNEEKEILFVRDKMQGDWALPGGYGEIGFTPSENLLKELKEEAGVSG
CCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
EIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSETSETKFIKRSELTNLSVKRT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCHHHHH
TMSQLSLLEKLSKTGKQYID
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]