Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835259

GI number: 15835259

Start: 770069

End: 771787

Strand: Reverse

Name: Not Available

Synonym: TC0644

Alternate gene names: NA

Gene position: 771787-770069 (Counterclockwise)

Preceding gene: 15835270

Following gene: 15835258

Centisome position: 71.93

GC content: 42.0

Gene sequence:

>1719_bases
ATGGTTTCTAGGGTTCCCGGAAATAGTGAGCCTATTGATGTAAATGCTATTGGAGACCTTTCTTTAATACAAAATCAGGG
ATCAAGCACCTATATACCAATGGTTTCGATTCCTGAAGAAGGTGTTTCGAAATCAGGGCAAGCACTAAAACATTCTGCAG
GGCTAATCGCTGGTATTGTGGTGTTAGGCGTTGCGTTAGCTATTGTAGCTGTTGCTTTAACGATACTCGCTCCGGGAGCT
CCTCAAGCTATAGTTTTAGCAATTGCCTTTGCTGGAATTTCTGTGGGAGGTGTTACTACACTTCGCAGTCTTATTAACGG
AATAAAGGATTTAGTTGCTCCTCGAATGTCTGTTAAGCAGCGAGCAAAAAGTGCTGCTTTACTCGGAGCTGGATTAGCAG
GTGCAGGCCTTGTATTGAAATTTGGATCTTCTTATATTCCAGGGGGATATGGAAGTACTATAGGAAAGTTTGGGGATATT
TCTTATAGTAGAGGGAGTGGAGCTTTGTTCGCAGGGTTTGCGCACTATCTCTATGTGCGGTTTTTTCAATCCAAAAAGGC
TGCATCAGGAGTTGACCTTACTCCAGAAGAAATGCTTGTTGAAGGGGCAAAAATTCGGAAGATCGCGAGATGTTTAGTCT
TATTAGGGGCTGGATTTGCTTGCTTAGGCATTTCTTTAGCTGTTGTTGGGACTCTTGTGGCAACAGGGGGCGCAGCCGCA
GCTCTTATAGTTTTTGCCCCTCCTTTGATTAGCTTAGGCATTTCTTTAGTTATCTCTAATATGTTGCATACGACTCTTGG
TCAATGGAGAGTCTTTGCTAGAGCGCAACAAGAACAAGATTTGCTTGCAGAGACTAAATTAAAAAACATCGCTCAGGCGG
ACTTTAGCCGTAAGGTAGAAGGAAAGGTGGAAGTGGATATTTCTGAAAGTGCCTTCACTTCCGCCTCTGTTGAACGTTTA
TCCGATAAAGAGATCAATCAAGCACTGTCTCTAACAAAAAAACAGAAAAGAATACTTGCCTTGTCAGGATTATTATTGGT
GGCAGGAATTACATGCACTGTATTAGCAGGCTTTGGCGGGTTCCCTGTTGTACAGGTTCTATTGCTCTCTTCCATAGGAG
GAGCTATATCGTCATCAGCCGTTCCTATGGTTGCTTCTGGAGTTATTCATGCCGTGCATCAATTAAGGGCTAGATTGCAA
ATTAGTTTGGCTCGAAGAAGGGAAGCTAGGCTGAAGGCTCGTATGATGAATGAAATGTTTGAGCAAGAAGGTCGTACCAT
TTTACTTTCAAAAGAAGAAAAAGATGAGACATGGGAACGAGCTGGGAGATCCGTAATTGTACAAACCGAAAAAGCTATTC
GCGAGCATGTGAATCAGGCGAATAAAGAGGAAAAGTTTCAGTCTATTATCGTTGCTACGATGATCCTTTTGTCTGGGTTA
GCTATTTTGGCATTGACTCTAGTACCGGGATTAGCTCCTATAGCTGGAGGAGTTTTGGCGATAGGAGGAGTGCTTTTAGG
AATTAGTATTACGATGTATCTTCAGAAATTGATTCATTGGTTACATCAACAGCTAGTTAAACTCTACAATCATGTTCAAC
ATAGACAAAGTATCATTGTTCAAGGGTCAGAAGAATGTGATTTTGACGCAGAAGATATCATAGTCGATCTTGTGGCAGAT
TCCTTTGAAATTGACGGAGATGCTTTCTTAGAAGCATAA

Upstream 100 bases:

>100_bases
CTTGTTTGATATGATAAAAATGAGATGTGCTACTTTTTATTGTGAAAGGGATTTTATTTTGTTGTTATAATTAATCTTAA
TTAAAAAGATTTTGTTTTTT

Downstream 100 bases:

>100_bases
GGGCTATTTTTTTATTCATCTAAATCACGAAAAGATTTCTATATGTTTATTAGCTAACTAATGAAGTTAGCTGATTCATG
TTCCTTTTCATCTTGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA
PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI
SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA
ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL
SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ
ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL
AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD
SFEIDGDAFLEA

Sequences:

>Translated_572_residues
MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA
PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI
SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA
ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL
SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ
ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL
AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD
SFEIDGDAFLEA
>Mature_572_residues
MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA
PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI
SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA
ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL
SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ
ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL
AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD
SFEIDGDAFLEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60295; Mature: 60295

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIV
CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH
VLGVALAIVAVALTILAPGAPQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDISYSRGSGALFAGFAHYLYVR
HHHHHHHHHCCCHHCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHH
FFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA
HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKVEVDISESAFTSASVERLSDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGG
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQISLARRREARLKARMMNEMF
HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL
HHCCCEEEEECCCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QGSEECDFDAEDIIVDLVADSFEIDGDAFLEA
ECCCCCCCCHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIV
CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH
VLGVALAIVAVALTILAPGAPQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDISYSRGSGALFAGFAHYLYVR
HHHHHHHHHCCCHHCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHH
FFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA
HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKVEVDISESAFTSASVERLSDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGG
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQISLARRREARLKARMMNEMF
HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL
HHCCCEEEEECCCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QGSEECDFDAEDIIVDLVADSFEIDGDAFLEA
ECCCCCCCCHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA