Click here to switch to the map view.

The map label for this gene is infA

Identifier: 15835214

GI number: 15835214

Start: 713896

End: 714117

Strand: Reverse

Name: infA

Synonym: TC0597

Alternate gene names: 15835214

Gene position: 714117-713896 (Counterclockwise)

Preceding gene: 15835217

Following gene: 161579044

Centisome position: 66.56

GC content: 44.59

Gene sequence:

>222_bases
ATGGCAAAAAAAGAAGATACGATCGTTCTAGAAGGTAGAGTGGAAGAATTATTGCCCGGAATGCATTTTAGGGTGATGTT
GGAGAACGGAGTCCCTATTACTGCGCATTTGTGTGGTAAAATGCGCATGAGCAATATCCGCTTGCTGGTTGGAGACCGCG
TAACTGTCGAGATGTCTACTTATGATTTGACGAAGGCTCGCGTTGTCTATAGACATCGTTAG

Upstream 100 bases:

>100_bases
CCTGAGGATGGCAGGTGTTATAGTCCTAACGAATATTCAAACCTGTTTTTTATTTCGATCAGGGATCAAGAGATAGGATA
TTTTTTAGGTTTTTTTAGGA

Downstream 100 bases:

>100_bases
GGCTGTTTTGCTGTCCTTTAATGACCTTTAATAGAGGTAAAGTCACGCAGTTTTAAGCGGAAAGCTTGATAATAATCTGC
GTCTGAAGTTACTATGCTCG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAKKEDTIVLEGRVEELLPGMHFRVMLENGVPITAHLCGKMRMSNIRLLVGDRVTVEMSTYDLTKARVVYRHR

Sequences:

>Translated_73_residues
MAKKEDTIVLEGRVEELLPGMHFRVMLENGVPITAHLCGKMRMSNIRLLVGDRVTVEMSTYDLTKARVVYRHR
>Mature_72_residues
AKKEDTIVLEGRVEELLPGMHFRVMLENGVPITAHLCGKMRMSNIRLLVGDRVTVEMSTYDLTKARVVYRHR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=57.1428571428571, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8413; Mature: 8282

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKEDTIVLEGRVEELLPGMHFRVMLENGVPITAHLCGKMRMSNIRLLVGDRVTVEMST
CCCCCCEEEEECCHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEEEEC
YDLTKARVVYRHR
CCCCEEEEEEECC
>Mature Secondary Structure 
AKKEDTIVLEGRVEELLPGMHFRVMLENGVPITAHLCGKMRMSNIRLLVGDRVTVEMST
CCCCCEEEEECCHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCEEEEEEEC
YDLTKARVVYRHR
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA