| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835217
GI number: 15835217
Start: 715953
End: 717899
Strand: Reverse
Name: Not Available
Synonym: TC0600
Alternate gene names: NA
Gene position: 717899-715953 (Counterclockwise)
Preceding gene: 15835218
Following gene: 15835214
Centisome position: 66.91
GC content: 42.89
Gene sequence:
>1947_bases ATGCCTAAGCCATGTTCAAATGACTGCAATCAGAATGAAGGTTGCAGTTTGACTATAGAAGAGGAAATCGAAATAGATTC GAGTGATAGTTCGAGCTCTTCAACAGGGATCTTGTCCACAACTTCTTCTTCTTCGGTTCAATCTACTGCAGAACGGGTGG ACAGTGTTATTAGCGATGTGGGCAGTTCTTCGACTTCTGAATCTTTATCAATAGATTTGGGAGTTAATGAAGAAGTGCTT TGCGGAGTGCGTGTTTGTAATTTTAGTGAAGAGGAAGAGAACAGCTTACAAACATCTTGTGAAATTGGATACGTTAATTC GAGCGGATTAGCTAACTGTGGCGTTTGGAGCGATGGTATTAGGTTGAGTGAAATGCTTCAGCAGCCCGTTACGGCCATAC CTAATGCAGGGGGATTGGCTTGTGCCTTGCTGACTAGAGGAATGGGTTTGTCGTGCTGTTCTTCGATCTCCCAGTATCAT CCAACGGTAAGGTCTTTGCTAGGGACCTGGTCTAGATTTTTTCAAAGATGTGCTTCGGGAAGCTTTCTTCTGATTTATAA TGGAGATGGAGGTCTTTTCGTAGAAAGAGCACTTCAGTTGATTCAGTGTCAGGAGTGGCTCTCTCGTATTCGTGTGGTTG GAATAAATCCTTCATTTTTTGTTACCTCAACTTCAAACAGCCACTTTTATTTGAGTCCAGGTAACTTAGGAATGATGTTA GATGTTAGTGGCTTTGTGGCGGCTAGACAAAGAGGATGTATTTCAAGAATTCCGTTTTCCCCCTATACACAAAGTATATT TCCTGAAGTTTGGGATTCTTGTTTCGAATTTGCCTTGCGATTGGAGTTCATGCGTTTAGCAGGGGTGGCCTCCCTATCGG CTGCAAGTTCTCCAGTTAGTGACGATTCGTGTTCATCTCGTTTACAGCTTGTGCGCGTGGTTTCTTCAGAAGAGAGTGTT GGTTTTACCCGCTTACAGGATGCTCTGAGTCAGGATATGACCTCTTCAGTGCACGCCGCGAATCCATTCCCTTTGCCTCA CATGCGATTGATTCTTCTATTGACGGGGTTAGCTAGACATACTCTAACCACAAGCAAGGCTGTATATTCGTATTCACCAT CTTCATGGGAAGCTTTAGATATGTTCGATGCTATGTTTACAGCTTCTTATATTGGAGGAGTTTTTTCTGAGATTTTCCTG CTATGCACAAACAGGCCTGATAGAGCTTCTCGTATGCGTTTGATTAGGATGTTGGCTAGGTTGTTTGGCTCATGGTCATG GTTGGCTGGGATTATGGAGTTAAGCTCTGGCTACGTAGTGACTATTCGATTATTACTTCAAAGTAGTCCTGGATCTTCCT GCATAAGGAATATGTTATTTTGGATGGAATCTTGCCTTACTCCAGTAATTCTTTTAGATATTTCGGAGAGGAATTGCCCT AGAGTTTGGAGTCGTGTTGTGGGATTGGGTATGAGAATCACTACACCTGCTATTTATAGGGAAGAACGGGAAAGGAATTC CAGGTCAAGTAGTCAGGGAGTAAGCTTAGTTAATGGGCGGCTAGATAGATATGGTCGTCGACAACATGCTGCTGTAGGGG GTTCTTTGGATTTGATATCTCTGACAATGGCTTCTTTAGTACAGTTGATGTTTGTTGGAATAGATGCTTTCAGCTTGAGG TTTCCAGAAGCTTGTCGAAGGGTTCCTTGTAATAATACCTCTTCACCTAATTCTACCGTCATTGCAAATAACACTACTGG ATGTGTTGGGGGTAGCATGGTAAAAAATGTTTTCCCTCAAATTACAGGGGTTTATGAAAGCGATCTGCAGACGGGAAGTG TGGCTCGATTGCTCAACACTATACGTATGATATGGTGCGGAGTGATGCTGCTGTACTTTTTATATACAGCATTCCGACTG GTAAGAAATTCTCGTCGTGGAAATTAA
Upstream 100 bases:
>100_bases TACTCAATTATAGACTCTGTCATACCTACGGTTGATAGCGATATGGGGTTATTAGAAAAGTTTTTAGTAGTAACAGGGGG CGTATTTAGGGGGAATTATT
Downstream 100 bases:
>100_bases ATTTTTTTTGATGGGTACAGGGAGCCTAGCCAGTGAGAACCATTGGTTAGGCTCTTTGGTTACAAGGTTTTTCGAGTTAA ATACTGAACAGCTATGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MPKPCSNDCNQNEGCSLTIEEEIEIDSSDSSSSSTGILSTTSSSSVQSTAERVDSVISDVGSSSTSESLSIDLGVNEEVL CGVRVCNFSEEEENSLQTSCEIGYVNSSGLANCGVWSDGIRLSEMLQQPVTAIPNAGGLACALLTRGMGLSCCSSISQYH PTVRSLLGTWSRFFQRCASGSFLLIYNGDGGLFVERALQLIQCQEWLSRIRVVGINPSFFVTSTSNSHFYLSPGNLGMML DVSGFVAARQRGCISRIPFSPYTQSIFPEVWDSCFEFALRLEFMRLAGVASLSAASSPVSDDSCSSRLQLVRVVSSEESV GFTRLQDALSQDMTSSVHAANPFPLPHMRLILLLTGLARHTLTTSKAVYSYSPSSWEALDMFDAMFTASYIGGVFSEIFL LCTNRPDRASRMRLIRMLARLFGSWSWLAGIMELSSGYVVTIRLLLQSSPGSSCIRNMLFWMESCLTPVILLDISERNCP RVWSRVVGLGMRITTPAIYREERERNSRSSSQGVSLVNGRLDRYGRRQHAAVGGSLDLISLTMASLVQLMFVGIDAFSLR FPEACRRVPCNNTSSPNSTVIANNTTGCVGGSMVKNVFPQITGVYESDLQTGSVARLLNTIRMIWCGVMLLYFLYTAFRL VRNSRRGN
Sequences:
>Translated_648_residues MPKPCSNDCNQNEGCSLTIEEEIEIDSSDSSSSSTGILSTTSSSSVQSTAERVDSVISDVGSSSTSESLSIDLGVNEEVL CGVRVCNFSEEEENSLQTSCEIGYVNSSGLANCGVWSDGIRLSEMLQQPVTAIPNAGGLACALLTRGMGLSCCSSISQYH PTVRSLLGTWSRFFQRCASGSFLLIYNGDGGLFVERALQLIQCQEWLSRIRVVGINPSFFVTSTSNSHFYLSPGNLGMML DVSGFVAARQRGCISRIPFSPYTQSIFPEVWDSCFEFALRLEFMRLAGVASLSAASSPVSDDSCSSRLQLVRVVSSEESV GFTRLQDALSQDMTSSVHAANPFPLPHMRLILLLTGLARHTLTTSKAVYSYSPSSWEALDMFDAMFTASYIGGVFSEIFL LCTNRPDRASRMRLIRMLARLFGSWSWLAGIMELSSGYVVTIRLLLQSSPGSSCIRNMLFWMESCLTPVILLDISERNCP RVWSRVVGLGMRITTPAIYREERERNSRSSSQGVSLVNGRLDRYGRRQHAAVGGSLDLISLTMASLVQLMFVGIDAFSLR FPEACRRVPCNNTSSPNSTVIANNTTGCVGGSMVKNVFPQITGVYESDLQTGSVARLLNTIRMIWCGVMLLYFLYTAFRL VRNSRRGN >Mature_647_residues PKPCSNDCNQNEGCSLTIEEEIEIDSSDSSSSSTGILSTTSSSSVQSTAERVDSVISDVGSSSTSESLSIDLGVNEEVLC GVRVCNFSEEEENSLQTSCEIGYVNSSGLANCGVWSDGIRLSEMLQQPVTAIPNAGGLACALLTRGMGLSCCSSISQYHP TVRSLLGTWSRFFQRCASGSFLLIYNGDGGLFVERALQLIQCQEWLSRIRVVGINPSFFVTSTSNSHFYLSPGNLGMMLD VSGFVAARQRGCISRIPFSPYTQSIFPEVWDSCFEFALRLEFMRLAGVASLSAASSPVSDDSCSSRLQLVRVVSSEESVG FTRLQDALSQDMTSSVHAANPFPLPHMRLILLLTGLARHTLTTSKAVYSYSPSSWEALDMFDAMFTASYIGGVFSEIFLL CTNRPDRASRMRLIRMLARLFGSWSWLAGIMELSSGYVVTIRLLLQSSPGSSCIRNMLFWMESCLTPVILLDISERNCPR VWSRVVGLGMRITTPAIYREERERNSRSSSQGVSLVNGRLDRYGRRQHAAVGGSLDLISLTMASLVQLMFVGIDAFSLRF PEACRRVPCNNTSSPNSTVIANNTTGCVGGSMVKNVFPQITGVYESDLQTGSVARLLNTIRMIWCGVMLLYFLYTAFRLV RNSRRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70923; Mature: 70792
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPCSNDCNQNEGCSLTIEEEIEIDSSDSSSSSTGILSTTSSSSVQSTAERVDSVISDV CCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH GSSSTSESLSIDLGVNEEVLCGVRVCNFSEEEENSLQTSCEIGYVNSSGLANCGVWSDGI CCCCCCCCEEEEECCCCHHEEEEHEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCC RLSEMLQQPVTAIPNAGGLACALLTRGMGLSCCSSISQYHPTVRSLLGTWSRFFQRCASG HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC SFLLIYNGDGGLFVERALQLIQCQEWLSRIRVVGINPSFFVTSTSNSHFYLSPGNLGMML CEEEEEECCCCHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCEEEECCCCEEEEE DVSGFVAARQRGCISRIPFSPYTQSIFPEVWDSCFEFALRLEFMRLAGVASLSAASSPVS ECHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDSCSSRLQLVRVVSSEESVGFTRLQDALSQDMTSSVHAANPFPLPHMRLILLLTGLARH CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH TLTTSKAVYSYSPSSWEALDMFDAMFTASYIGGVFSEIFLLCTNRPDRASRMRLIRMLAR HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LFGSWSWLAGIMELSSGYVVTIRLLLQSSPGSSCIRNMLFWMESCLTPVILLDISERNCP HHCCHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCH RVWSRVVGLGMRITTPAIYREERERNSRSSSQGVSLVNGRLDRYGRRQHAAVGGSLDLIS HHHHHHHHCCCEECCHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHH LTMASLVQLMFVGIDAFSLRFPEACRRVPCNNTSSPNSTVIANNTTGCVGGSMVKNVFPQ HHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH ITGVYESDLQTGSVARLLNTIRMIWCGVMLLYFLYTAFRLVRNSRRGN HHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PKPCSNDCNQNEGCSLTIEEEIEIDSSDSSSSSTGILSTTSSSSVQSTAERVDSVISDV CCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH GSSSTSESLSIDLGVNEEVLCGVRVCNFSEEEENSLQTSCEIGYVNSSGLANCGVWSDGI CCCCCCCCEEEEECCCCHHEEEEHEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCC RLSEMLQQPVTAIPNAGGLACALLTRGMGLSCCSSISQYHPTVRSLLGTWSRFFQRCASG HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC SFLLIYNGDGGLFVERALQLIQCQEWLSRIRVVGINPSFFVTSTSNSHFYLSPGNLGMML CEEEEEECCCCHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCEEEECCCCEEEEE DVSGFVAARQRGCISRIPFSPYTQSIFPEVWDSCFEFALRLEFMRLAGVASLSAASSPVS ECHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDSCSSRLQLVRVVSSEESVGFTRLQDALSQDMTSSVHAANPFPLPHMRLILLLTGLARH CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH TLTTSKAVYSYSPSSWEALDMFDAMFTASYIGGVFSEIFLLCTNRPDRASRMRLIRMLAR HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LFGSWSWLAGIMELSSGYVVTIRLLLQSSPGSSCIRNMLFWMESCLTPVILLDISERNCP HHCCHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCH RVWSRVVGLGMRITTPAIYREERERNSRSSSQGVSLVNGRLDRYGRRQHAAVGGSLDLIS HHHHHHHHCCCEECCHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHH LTMASLVQLMFVGIDAFSLRFPEACRRVPCNNTSSPNSTVIANNTTGCVGGSMVKNVFPQ HHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH ITGVYESDLQTGSVARLLNTIRMIWCGVMLLYFLYTAFRLVRNSRRGN HHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA