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The map label for this gene is gvpE1

Identifier: 16120001

GI number: 16120001

Start: 20095

End: 20670

Strand: Reverse

Name: gvpE1

Synonym: VNG6027G

Alternate gene names: 16120001

Gene position: 20670-20095 (Counterclockwise)

Preceding gene: 16120002

Following gene: 16120000

Centisome position: 5.66

GC content: 53.82

Gene sequence:

>576_bases
ATGGACGACTTGCTGGAGGAACTCACCGCAGACATCGATGCTAACGCCGCGATCTCGTTCGCAGTCACAGATCTCGAATC
AGTGATCGAATCCGACGGTGCGTCAGATCACGCAGACCAGCCGCCTGATGAGGGGGCAACGCAACGCTACACGGACACGC
CGCTGACTGATGACGCGGTCGCTACGATGGACGGGTGGCTTGATAATGACCAGCTTCACACGATCAGTGATGCCATCGTC
ACCGAACATATCGACGAGATTCTCCTTCTTCTGATTACTGTGCGAGACGGTGCCTGTGGAAAAGAACTGCTCCAGGATCT
CCGGCGGCTGTTTGGGGCAGACCTGAGTCCGGGTACAGTATACCCGCATTTAAATGACCTTGCAGTCGAAGGTGTACTTG
AGGTACAGAAATTGAGCAAGCGCAAAGTGTATCGCCTCTCCGATCCTGAAGGAGCGTTCACCCGAATAGACCACATGGTT
GATCAGTTGCTGCTGTTTTCGCTCGTACTCAAGGCGGTTATGACCGATTGCAAGGCGCGTCAATCACAATCCCAAGGAAG
AGAGACCAATGACTGA

Upstream 100 bases:

>100_bases
TCATCCTGTATGGCGAAAACCCGTTGACGCCCCTGCTCGGAATCGGCATCAGCCAGTCAGAGTCGATCCCCAAAATCACG
CTCACGGAGATGGTCTAACA

Downstream 100 bases:

>100_bases
GAACCTATACACATACGGTATCATCGAACAGGAAGATCTCGAATTAGATGTCGAAGGCGTTGCCGGAGCGGAACAGGTCT
ATACGGTCGATTACAAGACA

Product: GvpE protein, cluster A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MDDLLEELTADIDANAAISFAVTDLESVIESDGASDHADQPPDEGATQRYTDTPLTDDAVATMDGWLDNDQLHTISDAIV
TEHIDEILLLLITVRDGACGKELLQDLRRLFGADLSPGTVYPHLNDLAVEGVLEVQKLSKRKVYRLSDPEGAFTRIDHMV
DQLLLFSLVLKAVMTDCKARQSQSQGRETND

Sequences:

>Translated_191_residues
MDDLLEELTADIDANAAISFAVTDLESVIESDGASDHADQPPDEGATQRYTDTPLTDDAVATMDGWLDNDQLHTISDAIV
TEHIDEILLLLITVRDGACGKELLQDLRRLFGADLSPGTVYPHLNDLAVEGVLEVQKLSKRKVYRLSDPEGAFTRIDHMV
DQLLLFSLVLKAVMTDCKARQSQSQGRETND
>Mature_191_residues
MDDLLEELTADIDANAAISFAVTDLESVIESDGASDHADQPPDEGATQRYTDTPLTDDAVATMDGWLDNDQLHTISDAIV
TEHIDEILLLLITVRDGACGKELLQDLRRLFGADLSPGTVYPHLNDLAVEGVLEVQKLSKRKVYRLSDPEGAFTRIDHMV
DQLLLFSLVLKAVMTDCKARQSQSQGRETND

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPE1_HALSA (P13044)

Other databases:

- EMBL:   X15374
- EMBL:   M58557
- EMBL:   X55648
- EMBL:   AF016485
- EMBL:   AE004438
- PIR:   T08240
- RefSeq:   NP_045968.1
- RefSeq:   NP_395589.1
- ProteinModelPortal:   P13044
- GeneID:   1446783
- GeneID:   1449261
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AF016485_GR
- KEGG:   hal:VNG6027G
- HOGENOM:   HBG096378
- OMA:   TERPESH
- ProtClustDB:   CLSK539584
- BioCyc:   HSP64091:GVPE-MONOMER
- BioCyc:   HSP64091:VNG6027G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR

EC number: NA

Molecular weight: Translated: 21010; Mature: 21010

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLLEELTADIDANAAISFAVTDLESVIESDGASDHADQPPDEGATQRYTDTPLTDDAV
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ATMDGWLDNDQLHTISDAIVTEHIDEILLLLITVRDGACGKELLQDLRRLFGADLSPGTV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
YPHLNDLAVEGVLEVQKLSKRKVYRLSDPEGAFTRIDHMVDQLLLFSLVLKAVMTDCKAR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSQSQGRETND
HHHHCCCCCCC
>Mature Secondary Structure
MDDLLEELTADIDANAAISFAVTDLESVIESDGASDHADQPPDEGATQRYTDTPLTDDAV
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ATMDGWLDNDQLHTISDAIVTEHIDEILLLLITVRDGACGKELLQDLRRLFGADLSPGTV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
YPHLNDLAVEGVLEVQKLSKRKVYRLSDPEGAFTRIDHMVDQLLLFSLVLKAVMTDCKAR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSQSQGRETND
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2552415; 1864501; 1956294; 9847077; 11016950