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The map label for this gene is gvpF1

Identifier: 16120000

GI number: 16120000

Start: 19461

End: 20102

Strand: Reverse

Name: gvpF1

Synonym: VNG6026G

Alternate gene names: 16120000

Gene position: 20102-19461 (Counterclockwise)

Preceding gene: 16120001

Following gene: 16119999

Centisome position: 5.5

GC content: 53.58

Gene sequence:

>642_bases
ATGACTGAGAACCTATACACATACGGTATCATCGAACAGGAAGATCTCGAATTAGATGTCGAAGGCGTTGCCGGAGCGGA
ACAGGTCTATACGGTCGATTACAAGACACTCTCCGCTGTCGTCTCTGACATTGATACGACCGACCCCGAGCGCACCGATG
AGGACGTGGAAGCTCATAACAACGTGCTCCAGGAGGTATTGAAGCACGAAGAAGAACGCACAGTCGTCCCGATGAGCTTC
GGGATGGCGTTCAAAAGTGCGCGCACGCTAAAGGGTGTATTGCGCGGGGCGCGACGTGCATTGCGCAGTACGCTGAATGA
CATCGAGGGAACCGTCGAACTTGGCGTGAAGATACTCGGTCCTGGCGACGATACAGTCCCTCGAGAAGAAATCCAGGAAA
ACGTCACGGATCAACTAGCAGATCTGAGTATCAACGAGACCGAGAACGATCTCTTCACAGACCGCCTGATCATCAATAAG
TCGTACCTCGTCGACTTCGAGAAACGCGATGCTTTCGACTCCGCCATCGACGATGTCGAAGCGGAATACGACGAACTGAC
GATTCAGTACACGGGGCCGTGGCCGCCGTACAATTTCGTGGACATTCACATCGGCGCGGAACAGCAACAAGGAGGCCGAT
AA

Upstream 100 bases:

>100_bases
GACCACATGGTTGATCAGTTGCTGCTGTTTTCGCTCGTACTCAAGGCGGTTATGACCGATTGCAAGGCGCGTCAATCACA
ATCCCAAGGAAGAGAGACCA

Downstream 100 bases:

>100_bases
TGCATGTTCATCATAGACGATCTCTTCGTGAGCCCGTTTTTCTCCTTGCTGGATATCCTCCAGACGATGGCTCTCGACGA
GATGTACGACACCAAATCGA

Product: GvpF protein, cluster A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTENLYTYGIIEQEDLELDVEGVAGAEQVYTVDYKTLSAVVSDIDTTDPERTDEDVEAHNNVLQEVLKHEEERTVVPMSF
GMAFKSARTLKGVLRGARRALRSTLNDIEGTVELGVKILGPGDDTVPREEIQENVTDQLADLSINETENDLFTDRLIINK
SYLVDFEKRDAFDSAIDDVEAEYDELTIQYTGPWPPYNFVDIHIGAEQQQGGR

Sequences:

>Translated_213_residues
MTENLYTYGIIEQEDLELDVEGVAGAEQVYTVDYKTLSAVVSDIDTTDPERTDEDVEAHNNVLQEVLKHEEERTVVPMSF
GMAFKSARTLKGVLRGARRALRSTLNDIEGTVELGVKILGPGDDTVPREEIQENVTDQLADLSINETENDLFTDRLIINK
SYLVDFEKRDAFDSAIDDVEAEYDELTIQYTGPWPPYNFVDIHIGAEQQQGGR
>Mature_212_residues
TENLYTYGIIEQEDLELDVEGVAGAEQVYTVDYKTLSAVVSDIDTTDPERTDEDVEAHNNVLQEVLKHEEERTVVPMSFG
MAFKSARTLKGVLRGARRALRSTLNDIEGTVELGVKILGPGDDTVPREEIQENVTDQLADLSINETENDLFTDRLIINKS
YLVDFEKRDAFDSAIDDVEAEYDELTIQYTGPWPPYNFVDIHIGAEQQQGGR

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPF1_HALSA (Q9HI21)

Other databases:

- EMBL:   M58557
- EMBL:   X55648
- EMBL:   AF016485
- EMBL:   AE004438
- PIR:   T08239
- RefSeq:   NP_045967.1
- RefSeq:   NP_395588.1
- GeneID:   1446782
- GeneID:   1449260
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AF016485_GR
- KEGG:   hal:VNG6026G
- HOGENOM:   HBG098546
- OMA:   KSAMARI
- ProtClustDB:   CLSK539583
- BioCyc:   HSP64091:GVPF-MONOMER
- BioCyc:   HSP64091:VNG6026G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR009430

Pfam domain/function: PF06386 GvpL_GvpF

EC number: NA

Molecular weight: Translated: 23963; Mature: 23831

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENLYTYGIIEQEDLELDVEGVAGAEQVYTVDYKTLSAVVSDIDTTDPERTDEDVEAHN
CCCCEEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHH
NVLQEVLKHEEERTVVPMSFGMAFKSARTLKGVLRGARRALRSTLNDIEGTVELGVKILG
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEC
PGDDTVPREEIQENVTDQLADLSINETENDLFTDRLIINKSYLVDFEKRDAFDSAIDDVE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEECHHHEEECHHHHHHHHHHHHHH
AEYDELTIQYTGPWPPYNFVDIHIGAEQQQGGR
CCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
TENLYTYGIIEQEDLELDVEGVAGAEQVYTVDYKTLSAVVSDIDTTDPERTDEDVEAHN
CCCEEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHH
NVLQEVLKHEEERTVVPMSFGMAFKSARTLKGVLRGARRALRSTLNDIEGTVELGVKILG
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEC
PGDDTVPREEIQENVTDQLADLSINETENDLFTDRLIINKSYLVDFEKRDAFDSAIDDVE
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEECHHHEEECHHHHHHHHHHHHHH
AEYDELTIQYTGPWPPYNFVDIHIGAEQQQGGR
CCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1864501; 1956294; 9847077; 11016950