| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836589
GI number: 15836589
Start: 1210082
End: 1211173
Strand: Direct
Name: Not Available
Synonym: CPj1058
Alternate gene names: NA
Gene position: 1210082-1211173 (Clockwise)
Preceding gene: 15836588
Following gene: 15836590
Centisome position: 98.66
GC content: 41.85
Gene sequence:
>1092_bases ATGAAATTATATCAGACCTTGCGAGGTATTGTTTTAGTAAGTACGGGATGCATATTCTTAGGAATGCACGGAGGATATGC CGCTGAGGTTCCAGTGACTTCATCTGGGTATGAGAATCTTTTAGAATCTAAGGAACAGGATCCTTCAGGTCTAGCGATCC ACGATCGCATTTTGTTTAAGGTAGATGAAGAGAATGTAGTGACTGCCTTAGATGTGATCCATAAATTAAACTTACTATTT TATAATTCGTATCCTCATCTTATAGATTCTTTCCCTGCACGATCCCAGTACTATACTGCGATGTGGCCTGTGGTTCTTGA ATCTGTGATTGATGAGTTTTTGATGGTGGCAGATGCCAAGGCAAAGAGAATCGCTACAGATCCCACCGCAGTGAATCAAG AAATCGAAGAGATGTTCGGAAGAGATCTCTCTCCTTTGTATGCGCATTTTGAAATGAGTCCCAACGATATTTTTAATGTG ATCGATCGCACTTTGACAGCACAAAGGGTGATGGGTATGATGGTGCGCTCTAAGGTAATGTTGAAGGTGACTCCAGGGAA AATTCGAGAATATTACCGAAAGCTAGAAGAAGAAGCCTCTAGGAAAGTCATCTGGAAGTATCGTGTGTTGACGATTAAAG CCAACACAGAATCCTTGGCTAGCCAGATTGCTGATAAAGTGCGTGCTCGTCTAAATGAAGCGAAAACCTGGGATAAAGAT CGTTTAACTGCTCTTGTGATCTCTCAGGGAGGGCAACTCGTCTGCTCCGAAGAGTTTTCTCGAGAGAATAGTGAGCTCTC CCAAAGCCATAAGCAAGAGCTGGACTTGATTGGCTATCCTAAAGAGCTCTGTGGGTTGCCTAAGGCACATAAGTCAGGAT ATAAACTCTATATGTTGTTAGACAAAACCTCAGGTTCTATAGAGCCTTTAGATGTTATGGAGTCCAAGATCAAACAGCAT CTTTTTGCTTTAGAAGCTGAGAGTGTAGAGAAACAATATAAAGACAGATTACGCAAGCGCTACGGCTATGATGCTTCTAT GATTGCGAAACTTCTTTCTGAAGAAGCTCCACCTCTATTTTCCTTATTATAG
Upstream 100 bases:
>100_bases TTCTTTTTAGGAAAGAAAACACCTTCTCTCAGTGGTCAAAATTACCACAATTCCTTATAGTAAGTCCCTGGGCAGGTCAA AATCTATAGGGTAGGAAGTC
Downstream 100 bases:
>100_bases GGGATTGAGTGACAAGAAGTTCTCCTGCACAACTCTCCCGGTTTCTTTCTGAAATTCAAAATAAGCCGAAGAAAAGCCTC TCTCAAAATTTCTTAGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL
Sequences:
>Translated_363_residues MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL >Mature_363_residues MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_1058/CT_355/TC_0634 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1058_CHLPN (Q9Z6K1)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: G72001 - PIR: G86622 - RefSeq: NP_225252.1 - RefSeq: NP_301113.1 - RefSeq: NP_445331.1 - RefSeq: NP_877371.1 - ProteinModelPortal: Q9Z6K1 - PHCI-2DPAGE: Q9Z6K1 - GeneID: 1467779 - GeneID: 894709 - GeneID: 919825 - GeneID: 963120 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0792 - KEGG: cpj:CPj1058 - KEGG: cpn:CPn1058 - KEGG: cpt:CpB1100 - TIGR: CP_0792 - HOGENOM: HBG414048 - OMA: VIDEFLM - ProtClustDB: CLSK871331 - BioCyc: CPNE115711:CP_0792-MONOMER - BioCyc: CPNE115713:CPN1058-MONOMER - BioCyc: CPNE138677:CPJ1058-MONOMER - BioCyc: CPNE182082:CPB1100-MONOMER - InterPro: IPR008880
Pfam domain/function: SSF109998 Trigger_fac_C_bac
EC number: NA
Molecular weight: Translated: 41333; Mature: 41333
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFK CCHHHHHHHHHHEECCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE VDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAK ECCCHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH AKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRTLTAQRVMGMMVRSKVM HHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEE LKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD EEECCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL HHEEEEEECCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEEE DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH SLL HCC >Mature Secondary Structure MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFK CCHHHHHHHHHHEECCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE VDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAK ECCCHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH AKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRTLTAQRVMGMMVRSKVM HHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEE LKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD EEECCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL HHEEEEEECCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEEE DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH SLL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362