| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836588
GI number: 15836588
Start: 1207831
End: 1209933
Strand: Direct
Name: Not Available
Synonym: CPj1057
Alternate gene names: 15836588
Gene position: 1207831-1209933 (Clockwise)
Preceding gene: 15836587
Following gene: 15836589
Centisome position: 98.47
GC content: 41.42
Gene sequence:
>2103_bases ATGCCTGAGCCTCTATATACGAATAAGCTAATCACAGAGAAATCTCCATATTTGCTTCTTTATGCTCATACCCCTGTTAA TTGGTATCCTTGGGGAGCTGAGGCATTTCATATTGCAGCTATCGAGAATAAGCCCGTCTTCTTGTCTATAGGATGCAAGC ATTCTCGATGGTGTCAGGTGATGTTGCAGGAGAGCTACACGAATCCTGAAATTGCTGCTATGCTCAATGAATACTTCGTG AATGTAAAAGTAGATAAGGAAGAACTTCCCTATGTAGCCAAGCTGTATGGTGATCTTGCTCAGATGCTTGCCGTTTCCGG AGATCACCAAGAAACTGTCTCCTGGCCTTTAAACGTCTTTCTTACTCCCGATCTCGTTCCTTTTTTCTCTGTAAACTATT TGGGGAACGAGGGAAAACTCGGTCTTCCCTCATTCCCACAAATTATTGATAAGCTTCATTTTATGTGGGAGGATGCTGAG GAAAGAGAAGCTCTCGTCGAACAGGCAATGAAAGTTCTGGAAATCGCGTCGTTTTTAGAGGGGTGTGTAAGAAAAGAGAT CTTAGACGAGAGCTCTCTAAAGCGAACCGTAGCCGCGTTATACCAAGATATCGATCCCCATTATGGAGGAGTGAAAGCAT TTCCTAAACGATTGCCAGGTTTGCTCTTACAATTTTTCCTCCGATACAGCCTCGAATATCAGGAGAGCCGAGGCTTATTT TTTGTAGATCGCTCTTTGAGTATGGTGGCTTTGGGAGGAGTTCGAGATCACATTGGCGGGGGAGTTTATTCATACACTAT CGACGATAAGTGGTTGATCCCCGCTTTTGAAAAACGGCTGATTGATAATGCCTTAATGGCTTTAAATTATTTAGAAGCTT GGGCATGTCTGGGCAAAGAAGAATACCGTGGTATAGGAAAACAGATACTTTCCTATATCTTGAGTGAATTATACTCTCCA GAGGTGGGTGCCTTTTATAGCTCTGAGCAAGCAGAAAATTGGGGAGCAGGAGGACAAAATTTTTATACATGGTCTGTCGA AGAAATCTCCAATGCTTTGGGAGAAGATGCTGAGATTTTCTGTGATTACTACGGGATTTCTAGGGAGGGCTTCTTCAATG GCAGGAATATACTCCATATTCCTGTACATAGAGAAATAGAAGAGCTGTCAGAAAAATATCATCGTTCTATAGAGGCTATT GAAGATATCGTAGATAGATCTCGAGATATTTTAAAGGGGATTAGAGCCCAACGTTCCCATCGTTCTAAAGATGATCTATC TTTAACTTTTAACAATGGCTGGATGATTTATACTTTTGCCTACGCAGGCCGACTTCTTGGAGAGGTTGAGTATATTGAGA TTGGGAAAAAGTGTGGGGAATTTGTCCGAAATTCCCTCTATAAACACCATGAACTTTACCGGAGATGGAGAGAGGGAGAG GCAAAATATCGAGCGAGTTTAGAAGATTATGGTGCTCTTATTTTAGGGGTGCTAGCTCTTTATGAATCAGGATGTGGATC TTTCTGGTTAAGCTTTGCTGAAGAGCTGATGCAAGAAGTCGTCCTTTCCTTCCGTTCAGAAGAAGGAGGTTTTTATAGTG TTGATGGTCGGGATAGCACCTTGCTGATCAAGCAATCTCCCCTTTCTGATGGAGAGACGATCTCAGGAAACGCTCTAATC TGTCAATGCTTGCTCTCACTGCACCTAATCACAGAAAAAAAACACTACCTGACTTATGCTGAAGACATCTTGCAGATAGC TCAAGCATGTGCTCATACCCATAAGTTCTCTTCCTTAGGATTGCTGATTGCATCACAGAACTATTTTTCTAGAAAACATG TAAAAGTTTTAATTGCTTTAGGGGATCAAGAAGATCGCAGTCCTGTTTTGAAATGTCTCTCAGGTTTATTCCTTCCTTAT CTATCTCTAATTTGGATGACTCAGGAGAACCAAGAACATTTAGAGACTGTGCTTCCAGAATATGAGCACTGTCTTATCCC TAAAGGGGATTGCACAGCTACGACAATTTATGTTTTAGAAGTCGATCAATGCAAAAGATTTAAAGACTTAGAATTGTTTC GTCGTTATCTAATCTCTCTATAG
Upstream 100 bases:
>100_bases GGTTAGCTCTTCTGTTCATCATAAGAATTGTAAAATGTGTATTAAAAGACGAGAATTTTATTTAAAATAAATTATACACT TTTACTTTTTTAATTTTGCT
Downstream 100 bases:
>100_bases AACGCTATACTAGTTATTGATAAAGTGTTTTTTACTAATTAAAATTTATTCTTTTTAGGAAAGAAAACACCTTCTCTCAG TGGTCAAAATTACCACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MPEPLYTNKLITEKSPYLLLYAHTPVNWYPWGAEAFHIAAIENKPVFLSIGCKHSRWCQVMLQESYTNPEIAAMLNEYFV NVKVDKEELPYVAKLYGDLAQMLAVSGDHQETVSWPLNVFLTPDLVPFFSVNYLGNEGKLGLPSFPQIIDKLHFMWEDAE EREALVEQAMKVLEIASFLEGCVRKEILDESSLKRTVAALYQDIDPHYGGVKAFPKRLPGLLLQFFLRYSLEYQESRGLF FVDRSLSMVALGGVRDHIGGGVYSYTIDDKWLIPAFEKRLIDNALMALNYLEAWACLGKEEYRGIGKQILSYILSELYSP EVGAFYSSEQAENWGAGGQNFYTWSVEEISNALGEDAEIFCDYYGISREGFFNGRNILHIPVHREIEELSEKYHRSIEAI EDIVDRSRDILKGIRAQRSHRSKDDLSLTFNNGWMIYTFAYAGRLLGEVEYIEIGKKCGEFVRNSLYKHHELYRRWREGE AKYRASLEDYGALILGVLALYESGCGSFWLSFAEELMQEVVLSFRSEEGGFYSVDGRDSTLLIKQSPLSDGETISGNALI CQCLLSLHLITEKKHYLTYAEDILQIAQACAHTHKFSSLGLLIASQNYFSRKHVKVLIALGDQEDRSPVLKCLSGLFLPY LSLIWMTQENQEHLETVLPEYEHCLIPKGDCTATTIYVLEVDQCKRFKDLELFRRYLISL
Sequences:
>Translated_700_residues MPEPLYTNKLITEKSPYLLLYAHTPVNWYPWGAEAFHIAAIENKPVFLSIGCKHSRWCQVMLQESYTNPEIAAMLNEYFV NVKVDKEELPYVAKLYGDLAQMLAVSGDHQETVSWPLNVFLTPDLVPFFSVNYLGNEGKLGLPSFPQIIDKLHFMWEDAE EREALVEQAMKVLEIASFLEGCVRKEILDESSLKRTVAALYQDIDPHYGGVKAFPKRLPGLLLQFFLRYSLEYQESRGLF FVDRSLSMVALGGVRDHIGGGVYSYTIDDKWLIPAFEKRLIDNALMALNYLEAWACLGKEEYRGIGKQILSYILSELYSP EVGAFYSSEQAENWGAGGQNFYTWSVEEISNALGEDAEIFCDYYGISREGFFNGRNILHIPVHREIEELSEKYHRSIEAI EDIVDRSRDILKGIRAQRSHRSKDDLSLTFNNGWMIYTFAYAGRLLGEVEYIEIGKKCGEFVRNSLYKHHELYRRWREGE AKYRASLEDYGALILGVLALYESGCGSFWLSFAEELMQEVVLSFRSEEGGFYSVDGRDSTLLIKQSPLSDGETISGNALI CQCLLSLHLITEKKHYLTYAEDILQIAQACAHTHKFSSLGLLIASQNYFSRKHVKVLIALGDQEDRSPVLKCLSGLFLPY LSLIWMTQENQEHLETVLPEYEHCLIPKGDCTATTIYVLEVDQCKRFKDLELFRRYLISL >Mature_699_residues PEPLYTNKLITEKSPYLLLYAHTPVNWYPWGAEAFHIAAIENKPVFLSIGCKHSRWCQVMLQESYTNPEIAAMLNEYFVN VKVDKEELPYVAKLYGDLAQMLAVSGDHQETVSWPLNVFLTPDLVPFFSVNYLGNEGKLGLPSFPQIIDKLHFMWEDAEE REALVEQAMKVLEIASFLEGCVRKEILDESSLKRTVAALYQDIDPHYGGVKAFPKRLPGLLLQFFLRYSLEYQESRGLFF VDRSLSMVALGGVRDHIGGGVYSYTIDDKWLIPAFEKRLIDNALMALNYLEAWACLGKEEYRGIGKQILSYILSELYSPE VGAFYSSEQAENWGAGGQNFYTWSVEEISNALGEDAEIFCDYYGISREGFFNGRNILHIPVHREIEELSEKYHRSIEAIE DIVDRSRDILKGIRAQRSHRSKDDLSLTFNNGWMIYTFAYAGRLLGEVEYIEIGKKCGEFVRNSLYKHHELYRRWREGEA KYRASLEDYGALILGVLALYESGCGSFWLSFAEELMQEVVLSFRSEEGGFYSVDGRDSTLLIKQSPLSDGETISGNALIC QCLLSLHLITEKKHYLTYAEDILQIAQACAHTHKFSSLGLLIASQNYFSRKHVKVLIALGDQEDRSPVLKCLSGLFLPYL SLIWMTQENQEHLETVLPEYEHCLIPKGDCTATTIYVLEVDQCKRFKDLELFRRYLISL
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=707, Percent_Identity=29.4200848656294, Blast_Score=277, Evalue=2e-74, Organism=Caenorhabditis elegans, GI25147430, Length=683, Percent_Identity=28.4040995607613, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI20129985, Length=735, Percent_Identity=25.9863945578231, Blast_Score=229, Evalue=5e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 80156; Mature: 80025
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPLYTNKLITEKSPYLLLYAHTPVNWYPWGAEAFHIAAIENKPVFLSIGCKHSRWCQV CCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEEEEEEECCCCEEEEECCCCHHHHHH MLQESYTNPEIAAMLNEYFVNVKVDKEELPYVAKLYGDLAQMLAVSGDHQETVSWPLNVF HHHHCCCCHHHHHHHHHHHEEEEECHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCEEEE LTPDLVPFFSVNYLGNEGKLGLPSFPQIIDKLHFMWEDAEEREALVEQAMKVLEIASFLE ECCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GCVRKEILDESSLKRTVAALYQDIDPHYGGVKAFPKRLPGLLLQFFLRYSLEYQESRGLF HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCEE FVDRSLSMVALGGVRDHIGGGVYSYTIDDKWLIPAFEKRLIDNALMALNYLEAWACLGKE EEECCCCEEEECCHHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHH EYRGIGKQILSYILSELYSPEVGAFYSSEQAENWGAGGQNFYTWSVEEISNALGEDAEIF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEE CDYYGISREGFFNGRNILHIPVHREIEELSEKYHRSIEAIEDIVDRSRDILKGIRAQRSH EECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSKDDLSLTFNNGWMIYTFAYAGRLLGEVEYIEIGKKCGEFVRNSLYKHHELYRRWREGE CCCCCEEEEECCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AKYRASLEDYGALILGVLALYESGCGSFWLSFAEELMQEVVLSFRSEEGGFYSVDGRDST HHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCE LLIKQSPLSDGETISGNALICQCLLSLHLITEKKHYLTYAEDILQIAQACAHTHKFSSLG EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCE LLIASQNYFSRKHVKVLIALGDQEDRSPVLKCLSGLFLPYLSLIWMTQENQEHLETVLPE EEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC YEHCLIPKGDCTATTIYVLEVDQCKRFKDLELFRRYLISL HHHEECCCCCCCEEEEEEEEEHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure PEPLYTNKLITEKSPYLLLYAHTPVNWYPWGAEAFHIAAIENKPVFLSIGCKHSRWCQV CCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEEEEEEECCCCEEEEECCCCHHHHHH MLQESYTNPEIAAMLNEYFVNVKVDKEELPYVAKLYGDLAQMLAVSGDHQETVSWPLNVF HHHHCCCCHHHHHHHHHHHEEEEECHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCEEEE LTPDLVPFFSVNYLGNEGKLGLPSFPQIIDKLHFMWEDAEEREALVEQAMKVLEIASFLE ECCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GCVRKEILDESSLKRTVAALYQDIDPHYGGVKAFPKRLPGLLLQFFLRYSLEYQESRGLF HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCEE FVDRSLSMVALGGVRDHIGGGVYSYTIDDKWLIPAFEKRLIDNALMALNYLEAWACLGKE EEECCCCEEEECCHHHHHCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHH EYRGIGKQILSYILSELYSPEVGAFYSSEQAENWGAGGQNFYTWSVEEISNALGEDAEIF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEE CDYYGISREGFFNGRNILHIPVHREIEELSEKYHRSIEAIEDIVDRSRDILKGIRAQRSH EECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSKDDLSLTFNNGWMIYTFAYAGRLLGEVEYIEIGKKCGEFVRNSLYKHHELYRRWREGE CCCCCEEEEECCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AKYRASLEDYGALILGVLALYESGCGSFWLSFAEELMQEVVLSFRSEEGGFYSVDGRDST HHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCE LLIKQSPLSDGETISGNALICQCLLSLHLITEKKHYLTYAEDILQIAQACAHTHKFSSLG EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCE LLIASQNYFSRKHVKVLIALGDQEDRSPVLKCLSGLFLPYLSLIWMTQENQEHLETVLPE EEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC YEHCLIPKGDCTATTIYVLEVDQCKRFKDLELFRRYLISL HHHEECCCCCCCEEEEEEEEEHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]