Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836005

GI number: 15836005

Start: 549123

End: 550892

Strand: Reverse

Name: Not Available

Synonym: CPj0474

Alternate gene names: NA

Gene position: 550892-549123 (Counterclockwise)

Preceding gene: 15836006

Following gene: 15836004

Centisome position: 44.91

GC content: 45.08

Gene sequence:

>1770_bases
ATGTCTACATCACCAATTAGCAACGATCCCCGATATTTGTCTTTGTCTAATGCAACTGAGAAAACTTCTCTTCTTGCAAA
TAGCCGGAGTCTCTCGCCAGTACCAAATTCCCTAGTTCCTAGCAATCCTGAAGATACAGGATTGCGAAAAAGTATTTTCA
CCCATTCCGTGACTTTATTTGCTGGCCTGGTTGTTTTGCTGGTAGCGGTTTCTGTTGTTGTTGTCGCTTTGACCGTCTTA
GCTCCCGGAGTTCCTCAGGCTATTCTTCTTGGAATCGCCATTTCAGGCGTGGGTATTGGTGGATTTTCTATAATGAAGAG
CTTGGTTTATATGGTCCGAGACTATATGTCCCCCAGGATGCAGGAGTCGAGCAGAATCAAAAGTGCTTTAGCTGTAGGGA
CTGGATTTACTGTCATGGGTTTGGTCATGAAGGTGGGGGCGAATTTTGTTCCTGGAGGGTATGGGGGTCTCGTGGGTAGC
TTGGGATCCAGTGCGTATTCCCGGGGAAGCCAAACCACATTAGCAAGCTTCAGTCATTATATTTATACTAAGTTTTTCCG
TTCTGAAAAAGTTGCTAAAGGGGAGAAGCTTACAGAAGCAGAAACTATAAAAGAGGCGAAAAAATTACACTATATCACGT
TGTCAATTGCCACTATTGGCGTTGGTCTTGCGGTTTTGGGGATTCTCCTTGCCATTGCAGGAACGGTATTGCTAGGAGGC
GCTCCCGCAACGATTGCTATTATTTTAGCTCCCCCTTTAATTTCTATAGGGCTTACGACGGTTTTGCAAACGATACTCCA
TAGTAGTATCGGAAAGTGGAGAGCCTTTCTGCTTACTCAAGAAAAAAAAGATCTTTTTGTAGACACCTCCCTGAAAGACA
TTCGCTTAGAAAAATTGCCCCCCAGTGAGGTGGAAGAGAGTGAAACTTCCCAATCTGTGATAGAAGTTCCAGATTCAGAG
GGGATTGCAGAGACGAGGATCTCTGCGGAAGAAATCGATACGAGGCTTTCCCTGACGACAAGACAGAAGGTCATCTTTGC
TCTTGCGACACTCTTGCTCTTAGCAAGTATTGCTGCCTTCATAGTCACGGGATTTGGTGGATTGACAGTCATGCAAGTTC
TCCTTGTTGCTTCTGTAGGATCGGCGGTTGCTTCTGTAACACTCCCTATGGTTTCCTCAGGATTTTCCTACGTCGCCTAC
CAACTGAAAGCAAGATTGAATATCAGTAAATTACGTTGGAAAGAAGCAAAAAATAAAAAGCGGGTGCGCCAGTTCTTAAT
TGAGTCTGGAGTGATTGCCTCGGATCGAGAATTTAACCAAATGTGGAAGACAGTCTACAAAAAACAGATTCAGAAGACTG
ACGCTGCAATTCGTGAAGAGGTTCGCAATTTTGAGAAGGGTGGGGAAGTGAACAGCGCCCTTGTTGGTGGAATCTTACTT
GGTGTAGGAACTGGGATCATGCTTCTTGCCCTGGTCCCTGCATTTGCTCCTATCGTTCCTGGTATTCTTGCTCTTGGAGG
ATCGACGTTAGGAATCGCGGGATCGATTTTAATGAGGAAGTTTGTCAACTGGCTCTATGATGAGCTTGTGAAGCTCTATG
AGCGTCGACGTAATCGCCGTGAGCTTCTCTATGGTCCTGAAAGTAAAATGCGCTCCATTGCTACGGATTTAGTTGTTGAG
GCTCTTGCTGCTAGCCACGATCATCTATTTGATCTTGATGGTCCCGTAGATTTTATTGATGTGGATGTAGATATAGATGG
AGCTGCTTAG

Upstream 100 bases:

>100_bases
ATACTTTATTTGTAAATTGTTGTGGGATTGTTCTATTTTGTGGTGTAGTTGATATTAATAATTTATTTTATAATTAAAAA
TAATTATTAGTATTTCTTTT

Downstream 100 bases:

>100_bases
GCCAGGTCCTTGAATGTAAGATCCTCGAGCTTTGGGAGCTTGTCTGCCTTCTCTAATTTTATTTTCTCTTTTACATCTAG
TAGTTTACTTAATTATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVL
APGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGS
LGSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG
APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSE
GIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAY
QLKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL
GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVE
ALAASHDHLFDLDGPVDFIDVDVDIDGAA

Sequences:

>Translated_589_residues
MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVL
APGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGS
LGSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG
APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSE
GIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAY
QLKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL
GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVE
ALAASHDHLFDLDGPVDFIDVDVDIDGAA
>Mature_588_residues
STSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVLA
PGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSL
GSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGGA
PATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSEG
IAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQ
LKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILLG
VGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVEA
LAASHDHLFDLDGPVDFIDVDVDIDGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63016; Mature: 62885

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLF
CCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AGLVVLLVAVSVVVVALTVLAPGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH
QESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSLGSSAYSRGSQTTLASFSHY
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC
APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLP
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHEECCCC
PSEVEESETSQSVIEVPDSEGIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAF
CCHHHHHHHCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQLKARLNISKLRWKEAKNKK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
RVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLYGPESKMRSIATDLVVEALAASHDHLFDLDGPVDFIDVDVDIDGAA
HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
STSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLF
CCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AGLVVLLVAVSVVVVALTVLAPGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH
QESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSLGSSAYSRGSQTTLASFSHY
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC
APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLP
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHEECCCC
PSEVEESETSQSVIEVPDSEGIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAF
CCHHHHHHHCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQLKARLNISKLRWKEAKNKK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
RVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLYGPESKMRSIATDLVVEALAASHDHLFDLDGPVDFIDVDVDIDGAA
HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA