| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836004
GI number: 15836004
Start: 547386
End: 548912
Strand: Reverse
Name: Not Available
Synonym: CPj0473
Alternate gene names: NA
Gene position: 548912-547386 (Counterclockwise)
Preceding gene: 15836005
Following gene: 15836003
Centisome position: 44.75
GC content: 46.43
Gene sequence:
>1527_bases ATGGCAGTTGGTGGCGTAGGCGGCTCAAGATCTCCTTCCCCCATTCCTCCTAATAGAAGGAATAGTGAGGATGGAAAAGT AAGTCCTAAAGACAACTTAGGGGAACATACAGTTAGCAGTAGTGACAGTAGTCTTGCAAGTCAGGGCCCTACAATAGAAG AGAGAAAAGCCCAGTTAGGCGGGACTGATAAAATTCCTTTGCCATCTGTCAAAGAACCCGGAGATTCTCCAACTTCAGGA CGTTCTGGGGTACTTCAGAGAATTTGGAAAGGCGTTAAAGGGGTCTTTAAAAAAACCCCTCAAGCGCGTCCTGAAGTTTC TAGTCCACGTCTTCCATCCCATGTGCAACATGGCCAACGTCTTCCTGGACTCGAGGGCTTTAGAGATCGTATCCAGAAAA GATCTGAAAATCCAGAGGCAGATTTAGGGAAGATGAAACGTTCCTATTCTGATGGTGACCTTGATCGAGTAGGACACGAT TCTAATGAAGATTCTACAGAGGATAGCCGTTCTGAAGGAGGAGAGCCTTCTTCAAAGAGTTCTTCCTTCTTATCAGGAGT TCGAGGAGCGGTGTCTAAAGTTCATGGTGCCCTAGGTGATATTAAAGGAAAGTTCCAGCGTTCTGCTTCCGAAGATGATT TAACAACTCAGGGCGAAGATTCTGCCGGCGATACTGTAAAAGAAAGGCGTTCCGAAGAAGCAGAGGCTTCTTCGAAGAGT TCTTCTTTTTTATCAGGAGTTCGAGGAGCGACGTCTACAGTTCAGGGAGCCTTAGGTGACGCTAAAGAGAAGGTTTCGGC GTTCGGAGAGCAGGCTGCAGGTGCAATCAGATCAGCACCAGGGAATATCAGAACTAGATTCCAACGTTCTTCATCGGAAG GTGATCTTTCTAATGTGAATAAAGCAGCAAAACATCTGCGTAAGGCTTTAGAAAATTTGGAAAAAGTAGCTCCAGAACAA GTGTCACCAGAGGTGGCTTCTAGGGTGCAATCTCTTCTTGCACGCATGGAGCAATTGACTCATCAGGAACCTCCTACTGT GGAGGATCTTATTACTTTCGTAGAATCCAATGTAGGTAGTGATTCTGTGGAGTATGCATCCATCGTACCTCAAGATGGAT CGCAAGCCCCAGCAGAGACTGCGGAAGCTCCCGAAACAGGTGGGGTAGAGGGATCTGCAGCGCAGGGAGCATGGAAAGCG TTACGGGATTTTGTAGTTAGCATATTCCAAGCGGTAGCGAGCTTCTTTAGGGCAATTGCTTCAAGATTAAGTTCAGCACG ACGTGAATCAGCTGTAGATGATCTTGCATCAGAAAGTAATACACAATGGTTTGTGGAGCAAGAGGGCGTTTCAAATCCAT CGGCTGCACCTAGCTTATCTTTTGCGGAAGAGATCGCTCGTAGAGCTGCAGAAATGAGTAACAGAAATGCCCAGAGTCTT GAAAAATTGGAATCAGGCAATGTGACTGATCCTGTCATTCAACAAGGCTTAGGATTAGCTAGATCATTTGCTCCAGAGGG ACAGTAG
Upstream 100 bases:
>100_bases TTTTGTTTATTTTAATTTATATTTTGTTTTTAAAATATTTTTTATTTTAACATTTGTTTAATAGTTTTTATTAAATAATT TATCATTTTAAGGTTCAATT
Downstream 100 bases:
>100_bases TCGTTATCTCACTGTTTCTCTATGCGCAAGGGAAACTTGAAGAGTTTTAATTAAAACTCTTCAATATGTTGATTATTTTA ATATATTTAAAAGCATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MAVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGPTIEERKAQLGGTDKIPLPSVKEPGDSPTSG RSGVLQRIWKGVKGVFKKTPQARPEVSSPRLPSHVQHGQRLPGLEGFRDRIQKRSENPEADLGKMKRSYSDGDLDRVGHD SNEDSTEDSRSEGGEPSSKSSSFLSGVRGAVSKVHGALGDIKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKS SSFLSGVRGATSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVNKAAKHLRKALENLEKVAPEQ VSPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGSDSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKA LRDFVVSIFQAVASFFRAIASRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLSFAEEIARRAAEMSNRNAQSL EKLESGNVTDPVIQQGLGLARSFAPEGQ
Sequences:
>Translated_508_residues MAVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGPTIEERKAQLGGTDKIPLPSVKEPGDSPTSG RSGVLQRIWKGVKGVFKKTPQARPEVSSPRLPSHVQHGQRLPGLEGFRDRIQKRSENPEADLGKMKRSYSDGDLDRVGHD SNEDSTEDSRSEGGEPSSKSSSFLSGVRGAVSKVHGALGDIKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKS SSFLSGVRGATSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVNKAAKHLRKALENLEKVAPEQ VSPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGSDSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKA LRDFVVSIFQAVASFFRAIASRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLSFAEEIARRAAEMSNRNAQSL EKLESGNVTDPVIQQGLGLARSFAPEGQ >Mature_507_residues AVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGPTIEERKAQLGGTDKIPLPSVKEPGDSPTSGR SGVLQRIWKGVKGVFKKTPQARPEVSSPRLPSHVQHGQRLPGLEGFRDRIQKRSENPEADLGKMKRSYSDGDLDRVGHDS NEDSTEDSRSEGGEPSSKSSSFLSGVRGAVSKVHGALGDIKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKSS SFLSGVRGATSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVNKAAKHLRKALENLEKVAPEQV SPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGSDSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKAL RDFVVSIFQAVASFFRAIASRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLSFAEEIARRAAEMSNRNAQSLE KLESGNVTDPVIQQGLGLARSFAPEGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53745; Mature: 53614
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGPTIEERKAQLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCHHHHHHHCC GTDKIPLPSVKEPGDSPTSGRSGVLQRIWKGVKGVFKKTPQARPEVSSPRLPSHVQHGQR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC LPGLEGFRDRIQKRSENPEADLGKMKRSYSDGDLDRVGHDSNEDSTEDSRSEGGEPSSKS CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCHH SSFLSGVRGAVSKVHGALGDIKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SSFLSGVRGATSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH KAAKHLRKALENLEKVAPEQVSPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGS HHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC DSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKALRDFVVSIFQAVASFFRAIA CCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLSFAEEIARRAAEMSNRNAQSL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH EKLESGNVTDPVIQQGLGLARSFAPEGQ HHHHCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGPTIEERKAQLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCHHHHHHHCC GTDKIPLPSVKEPGDSPTSGRSGVLQRIWKGVKGVFKKTPQARPEVSSPRLPSHVQHGQR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC LPGLEGFRDRIQKRSENPEADLGKMKRSYSDGDLDRVGHDSNEDSTEDSRSEGGEPSSKS CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCHH SSFLSGVRGAVSKVHGALGDIKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SSFLSGVRGATSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH KAAKHLRKALENLEKVAPEQVSPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGS HHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC DSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKALRDFVVSIFQAVASFFRAIA CCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLSFAEEIARRAAEMSNRNAQSL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH EKLESGNVTDPVIQQGLGLARSFAPEGQ HHHHCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA