| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835948
GI number: 15835948
Start: 459927
End: 461207
Strand: Reverse
Name: Not Available
Synonym: CPj0415
Alternate gene names: NA
Gene position: 461207-459927 (Counterclockwise)
Preceding gene: 15835949
Following gene: 15835947
Centisome position: 37.6
GC content: 41.92
Gene sequence:
>1281_bases TTGACTCTAATTTTTGTTATTATTATCGTTTGGTGCAATGCTTTTCTGATCAAATTGTGCGTGATAATGGGGCTGCAATC CAGGTTACAACATTGTATAGAAGTGTCCCAGAATTCGAACTTTGATTCACAAGTAAAACAGTTTATCTATGCGTGCCAAG ATAAGACATTAAGGCAGTCTGTACTCAAGATTTTCCGCTACCATCCTTTACTAAAAATTCATGATATTGCTCGGGCCGTC TATCTTTTGATGGCCTTAGAAGAAGGCGAGGATTTAGGCTTAAGCTTTTTAAATGTACAGCAGTACCCTTCAGGTGCTGT AGAACTGTTTTCTTGTGGGGGATTTCCTTGGAAAGGATTACCTTATCCTGCAGAACATGCGGAATTTGGCCTACTCCTGT TACAGATCGCAGAGTTTTATGAAGAGAGTCAGGCATACGTCTCTAAAATGAGTCATTTTCAACAGGCACTCTTTGATCAC CAAGGGAGCGTCTTTCCCTCTCTCTGGAGCCAGGAGAACTCTCGACTCCTAAAAGAAAAGACAACTCTTAGCCAATCGTT TCTCTTCCAATTAGGAATGCAAATTCACCCAGAATACAGTCTTGAGGATCCTGCACTAGGGTTCTGGATGCAAAGAACGC GTTCTTCATCCGCTTTTGTAGCCGCTTCAGGATGTCAAAGTAGCTTGGGAGCGTATTCCTCAGGGGATGTCGGTGTTATC GCTTATGGACCTTGCTCTGGAGACATTAGTGATTGTTATTATTTTGGATGTTGTGGAATCGCTAAAGAGTTCGTGTGCCA AAAATCTCACCAAACTACAGAGATTTCTTTTCTCACCTCTACAGGAAAGCCTCATCCCAGAAATACGGGATTTTCCTACC TTCGAGATTCCTATGTACATCTGCCGATCCGCTGTAAGATCACTATTTCCGACAAGCAATATCGCGTGCACGCTGCGTTG GCTGAGGCCACCTCTGCCATGACGTTTTCTATTTTCTGTAAGGGGAAGAATTGTCAGGTTGTTGACGGCCCTCGCTTGCG CTCCTGTTCCCTAGATTCTTATAAAGGTCCCGGAAACGACATTATGATTCTTGGGGAAAATGACGCAATCAACATTGTTT CTGCAAGTCCCTATATGGAAATTTTTGCTTTGCAAGGCAAAGAAAAATTTTGGAATGCAGACTTTTTGATTAATATTCCT TACAAAGAAGAGGGCGTCATGTTAATTTTTGAAAAAAAAGTGACCTCTGAGAAAGGAAGATTCTTTACGAAGATGAATTA A
Upstream 100 bases:
>100_bases AAAAGAATGAAGCGCTTGATAGAAACTCCGAATAAGCATTCTTAATTCTTGTAGTCTTCTTTGTCTCAGTTGTTAGAGTC AGACCGGTTTTTTACCGGGC
Downstream 100 bases:
>100_bases TTTTGGGTCTGTAATTGTGTTTAAGAATTGTTTGTATTAAAATGATTCTTTTTATACGAGGAGAGCACATTCTAATGGAA CTTCTTCCACACGAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTLIFVIIIVWCNAFLIKLCVIMGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAV YLLMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDH QGSVFPSLWSQENSRLLKEKTTLSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVI AYGPCSGDISDCYYFGCCGIAKEFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAAL AEATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIP YKEEGVMLIFEKKVTSEKGRFFTKMN
Sequences:
>Translated_426_residues MTLIFVIIIVWCNAFLIKLCVIMGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAV YLLMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDH QGSVFPSLWSQENSRLLKEKTTLSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVI AYGPCSGDISDCYYFGCCGIAKEFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAAL AEATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIP YKEEGVMLIFEKKVTSEKGRFFTKMN >Mature_425_residues TLIFVIIIVWCNAFLIKLCVIMGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQSVLKIFRYHPLLKIHDIARAVY LLMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGLPYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQ GSVFPSLWSQENSRLLKEKTTLSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVIA YGPCSGDISDCYYFGCCGIAKEFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVHLPIRCKITISDKQYRVHAALA EATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGNDIMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPY KEEGVMLIFEKKVTSEKGRFFTKMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47947; Mature: 47815
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIFVIIIVWCNAFLIKLCVIMGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH VLKIFRYHPLLKIHDIARAVYLLMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGL HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHCCCCCCCEEEEECCCCCCCCC PYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHH TTLSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVI HHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEE AYGPCSGDISDCYYFGCCGIAKEFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVH EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCEEE LPIRCKITISDKQYRVHAALAEATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGND EEEEEEEEECCCCEEEHHHHHHHHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCE IMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGR EEEEECCCEEEEEECCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCC FFTKMN EEEECC >Mature Secondary Structure TLIFVIIIVWCNAFLIKLCVIMGLQSRLQHCIEVSQNSNFDSQVKQFIYACQDKTLRQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH VLKIFRYHPLLKIHDIARAVYLLMALEEGEDLGLSFLNVQQYPSGAVELFSCGGFPWKGL HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHCCCCCCCEEEEECCCCCCCCC PYPAEHAEFGLLLLQIAEFYEESQAYVSKMSHFQQALFDHQGSVFPSLWSQENSRLLKEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHH TTLSQSFLFQLGMQIHPEYSLEDPALGFWMQRTRSSSAFVAASGCQSSLGAYSSGDVGVI HHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCEEEE AYGPCSGDISDCYYFGCCGIAKEFVCQKSHQTTEISFLTSTGKPHPRNTGFSYLRDSYVH EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCEEE LPIRCKITISDKQYRVHAALAEATSAMTFSIFCKGKNCQVVDGPRLRSCSLDSYKGPGND EEEEEEEEECCCCEEEHHHHHHHHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCE IMILGENDAINIVSASPYMEIFALQGKEKFWNADFLINIPYKEEGVMLIFEKKVTSEKGR EEEEECCCEEEEEECCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEEECCCCCCCCC FFTKMN EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA