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The map label for this gene is ybgI

Identifier: 15835672

GI number: 15835672

Start: 171210

End: 171965

Strand: Reverse

Name: ybgI

Synonym: CPj0137

Alternate gene names: 15835672

Gene position: 171965-171210 (Counterclockwise)

Preceding gene: 15835673

Following gene: 15835671

Centisome position: 14.02

GC content: 44.05

Gene sequence:

>756_bases
ATGAATGTTGCGGATCTCCTTTCTCATCTTGAGACTCTTCTCTCATCAAAAATATTTCAGGATTATGGACCCAACGGACT
TCAAGTTGGAGATCCCCAAACTCCGGTAAAGAAAATCGCTGTTGCAGTTACCGCAGATCTAGAAACCATAAAACAAGCTG
TTGCGGCCGAAGCAAACGTTCTCATTGTACACCACGGAATTTTTTGGAAAGGTATGCCCTATCCTATTACCGGCATGATC
CATAAGCGCATCCAATTACTAATAGAACACAATATCCAACTCATTGCCTACCACCTTCCTTTGGATGCTCACCCTACCTT
AGGAAATAACTGGAGAGTTGCCCTGGATCTAAATTGGCATGACTTGAAGCCCTTTGGTTCTTCCCTCCCTTATTTAGGAG
TGCAAGGCTCTTTCTCTCCTATCGATATAGATTCTTTCATTGACCTGTTATCTCAATATTACCAAGCTCCCCTAAAAGGA
TCTGCCTTGGGCGGCCCCTCTAGAGTCTCCTCAGCAGCTCTGATCTCAGGAGGAGCTTATAGAGAACTCTCTTCGGCAGC
CACGTCCCAAGTCGATTGCTTCATCACAGGAAATTTTGATGAACCTGCATGGTCGACAGCTCTAGAAAGCAATATCAACT
TCCTAGCATTTGGACATACAGCCACAGAAAAAGTAGGTCCAAAATCTCTTGCAGAGCATCTAAAAAGCGAATTTCCTATT
TCCACAACCTTTATAGATACGGCCAACCCCTTCTAA

Upstream 100 bases:

>100_bases
ATAGTTTGATGAGCTAAGAATACTTACTTGTTTTTATAGCAAAACCTTTACAATAATGGGCACTTGTGTACTAATGCTAT
TTTTTAAATAAGTCTGTTCT

Downstream 100 bases:

>100_bases
TCTTTAAACCAAGATTTGTTCTTGGCTTTTTCTTAAAGATTGTCTTATAATGAGCTTTCTCATTCATCCTGACTCTTAAA
AAGGAGTTCCTTCCCTCATG

Product: Acr family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNVADLLSHLETLLSSKIFQDYGPNGLQVGDPQTPVKKIAVAVTADLETIKQAVAAEANVLIVHHGIFWKGMPYPITGMI
HKRIQLLIEHNIQLIAYHLPLDAHPTLGNNWRVALDLNWHDLKPFGSSLPYLGVQGSFSPIDIDSFIDLLSQYYQAPLKG
SALGGPSRVSSAALISGGAYRELSSAATSQVDCFITGNFDEPAWSTALESNINFLAFGHTATEKVGPKSLAEHLKSEFPI
STTFIDTANPF

Sequences:

>Translated_251_residues
MNVADLLSHLETLLSSKIFQDYGPNGLQVGDPQTPVKKIAVAVTADLETIKQAVAAEANVLIVHHGIFWKGMPYPITGMI
HKRIQLLIEHNIQLIAYHLPLDAHPTLGNNWRVALDLNWHDLKPFGSSLPYLGVQGSFSPIDIDSFIDLLSQYYQAPLKG
SALGGPSRVSSAALISGGAYRELSSAATSQVDCFITGNFDEPAWSTALESNINFLAFGHTATEKVGPKSLAEHLKSEFPI
STTFIDTANPF
>Mature_251_residues
MNVADLLSHLETLLSSKIFQDYGPNGLQVGDPQTPVKKIAVAVTADLETIKQAVAAEANVLIVHHGIFWKGMPYPITGMI
HKRIQLLIEHNIQLIAYHLPLDAHPTLGNNWRVALDLNWHDLKPFGSSLPYLGVQGSFSPIDIDSFIDLLSQYYQAPLKG
SALGGPSRVSSAALISGGAYRELSSAATSQVDCFITGNFDEPAWSTALESNINFLAFGHTATEKVGPKSLAEHLKSEFPI
STTFIDTANPF

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=37.246963562753, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y137_CHLPN (Q9Z946)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A86508
- PIR:   F72114
- RefSeq:   NP_224345.1
- RefSeq:   NP_300196.1
- RefSeq:   NP_445177.1
- RefSeq:   NP_876414.1
- ProteinModelPortal:   Q9Z946
- SMR:   Q9Z946
- GeneID:   1466821
- GeneID:   894813
- GeneID:   918925
- GeneID:   963264
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0635
- KEGG:   cpj:CPj0137
- KEGG:   cpn:CPn0137
- KEGG:   cpt:CpB0138
- TIGR:   CP_0635
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- PhylomeDB:   Q9Z946
- ProtClustDB:   CLSK871189
- BioCyc:   CPNE115711:CP_0635-MONOMER
- BioCyc:   CPNE115713:CPN0137-MONOMER
- BioCyc:   CPNE138677:CPJ0137-MONOMER
- BioCyc:   CPNE182082:CPB0138-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 27236; Mature: 27236

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVADLLSHLETLLSSKIFQDYGPNGLQVGDPQTPVKKIAVAVTADLETIKQAVAAEANV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LIVHHGIFWKGMPYPITGMIHKRIQLLIEHNIQLIAYHLPLDAHPTLGNNWRVALDLNWH
EEEECCEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECHH
DLKPFGSSLPYLGVQGSFSPIDIDSFIDLLSQYYQAPLKGSALGGPSRVSSAALISGGAY
CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCHH
RELSSAATSQVDCFITGNFDEPAWSTALESNINFLAFGHTATEKVGPKSLAEHLKSEFPI
HHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHCCCC
STTFIDTANPF
EEEEECCCCCC
>Mature Secondary Structure
MNVADLLSHLETLLSSKIFQDYGPNGLQVGDPQTPVKKIAVAVTADLETIKQAVAAEANV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LIVHHGIFWKGMPYPITGMIHKRIQLLIEHNIQLIAYHLPLDAHPTLGNNWRVALDLNWH
EEEECCEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECHH
DLKPFGSSLPYLGVQGSFSPIDIDSFIDLLSQYYQAPLKGSALGGPSRVSSAALISGGAY
CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCHH
RELSSAATSQVDCFITGNFDEPAWSTALESNINFLAFGHTATEKVGPKSLAEHLKSEFPI
HHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHCCCC
STTFIDTANPF
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362