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The map label for this gene is pepF

Identifier: 15835671

GI number: 15835671

Start: 169277

End: 171112

Strand: Reverse

Name: pepF

Synonym: CPj0136

Alternate gene names: 15835671

Gene position: 171112-169277 (Counterclockwise)

Preceding gene: 15835672

Following gene: 15835670

Centisome position: 13.95

GC content: 40.41

Gene sequence:

>1836_bases
ATGACTACTGAACTGAAAACCGAAGCACTCCCAACAAGAACTCAAGTAGATCCAAAGCATTGTTGGGACACAACTCTCAT
GTACGCAAATAGAGAGGAGTGGAAAAAAGATTTCGATCTTTGTAGCTCTGGAAAAGATCGTTCTCCCATATGGCCCGAAT
TCTCTCCCTCTCATTATCAAATCGATAACCCCGAATCTTTACTCGAACTTTTATCAAAAAAATTCTCTGTAGAACGAAAA
TTAGACCAACTCTACATATACGCTCACCTCATCCACGATCAAGATATTACAAATCCCGAAGGGGAAAGCGACTACCAATC
CATTGTCTATCTCTACACTCTCTTTTCTCAGGAAATTTCTTGGATCCAACCAGCTTTAATTGCTCTTTCTGAAGAAAAAG
TCGCTGCCTTGCTATCCAGCTCAGTGCTCGCTCCCTATAGATTTTACCTAGAAAAAATTTTCCGTCTTTCTCCCCACACA
GGAACAGCAAACGAAGAAAAGATCTTAGCCTCCTCGTTTGCAGCCCTTAATGTCTCAAATAAAGCTTTCTCTTCCTTAAG
CGATGCAGAAATTCCTTTTGGTATAGCTAAAGATTCGAACGGAGAAGAACATCCGCTATCCCATGCCCTGGCTTCGCTGT
ATATGCAATCCCCAGATCAGGAATTGCGCCGTACTGCCTACTTAGCTCAATTCCAACGTTACTATGATTACCGTAACACC
TTCGCGAATCTTCTCAATGGGAAAGTCCAAGCGCATCTCTTTGAAGCCAAAGCAAGAAATTACCCTTCGTGCCTAGAGGC
ATCCCTATTCCAACATAACATCCCTACAACTGTTTATATCAATCTTATAAACGAAACAAAGAAACACACTTCTCTTATCA
ATCGGTATTTTAACCTAAAAAAAGAAGCTCTAAATCTAAAAGAATTCCACTTTTATGATGTTTATGCTCCTATTTCCCAA
ACTACAAGTAAGAATTATAGTTATGAAGAAGGCGTTGACCTAGTTTGCAAAAGCCTCCTTCCCTTAGGGACTCATTATGT
TGAAATTCTAAGAAATGGTCTTCTTTCAAATCGTTGGGTAGACAGATACGAAAATAAGCACAAGCGTTCGGGAGCCTACT
CCTCAGGATGCTATGATAGCGCTCCTTATATTCTTCTAAACTACACGAATACACTCTATGACGTTTCCGTCATTGCCCAT
GAAGCTGGACATAGCATGCACTCCTACTTCAGTAGAGAAGCACAGCCCTATCATGATGCCCAATACCCTCTGTTTCTTGC
TGAAATTGCCTCAACATTCAATGAGATGCTCCTCATGGAAGCTCTCAGCAAATCAGATCAAAGTAAAGAAGACAAAATCG
TAATTATCACTAAAACTCTAGACACCATATTTGCGACTCTGTTCCGTCAAACCTTTTTCGCTGCCTTCGAATACGAAATT
CATTCTGCAGCAGAACAAGGAACTCCTCTTACTGAAGAGTTCCTCTCCGCAACTTACGGTAATTTACAAAAAGAATTCTA
CGGAGGTGTTGTAACCTCGGATTCCCTATCTGCATTAGAATGGGCTAGAATCCCTCACTTCTACTATAATTTCTATGTTT
ATCAATATGCGACAGGTATCATAGCTGCCCTCTCCTTTGCTGAAAAAATTCTTACACAAGAACCAGGGGCTCTCGAACTT
TATTTAAAATTTTTGAAAAGCGGAAGGTCTGACTTCCCACTCAATATATTAAAGAAATCGGGATTGGATATGACCACCTC
TGCTCCATTAGATAAAGCCTTTGCATTCATTACGAAAAAGATAGACCTACTCTCTTCCTTGCTTTCAGAAGATTGA

Upstream 100 bases:

>100_bases
TAATCTTTAAACCAAGATTTGTTCTTGGCTTTTTCTTAAAGATTGTCTTATAATGAGCTTTCTCATTCATCCTGACTCTT
AAAAAGGAGTTCCTTCCCTC

Downstream 100 bases:

>100_bases
GTTTTTAGCACTTAAAATTATTGAGTGCTAAAATTATTGCACAAAAAAAAACGCTTTGTTATCGTGATTGCAGAAATAGC
AAAGTCTCTTAGAACGTAAA

Product: oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MTTELKTEALPTRTQVDPKHCWDTTLMYANREEWKKDFDLCSSGKDRSPIWPEFSPSHYQIDNPESLLELLSKKFSVERK
LDQLYIYAHLIHDQDITNPEGESDYQSIVYLYTLFSQEISWIQPALIALSEEKVAALLSSSVLAPYRFYLEKIFRLSPHT
GTANEEKILASSFAALNVSNKAFSSLSDAEIPFGIAKDSNGEEHPLSHALASLYMQSPDQELRRTAYLAQFQRYYDYRNT
FANLLNGKVQAHLFEAKARNYPSCLEASLFQHNIPTTVYINLINETKKHTSLINRYFNLKKEALNLKEFHFYDVYAPISQ
TTSKNYSYEEGVDLVCKSLLPLGTHYVEILRNGLLSNRWVDRYENKHKRSGAYSSGCYDSAPYILLNYTNTLYDVSVIAH
EAGHSMHSYFSREAQPYHDAQYPLFLAEIASTFNEMLLMEALSKSDQSKEDKIVIITKTLDTIFATLFRQTFFAAFEYEI
HSAAEQGTPLTEEFLSATYGNLQKEFYGGVVTSDSLSALEWARIPHFYYNFYVYQYATGIIAALSFAEKILTQEPGALEL
YLKFLKSGRSDFPLNILKKSGLDMTTSAPLDKAFAFITKKIDLLSSLLSED

Sequences:

>Translated_611_residues
MTTELKTEALPTRTQVDPKHCWDTTLMYANREEWKKDFDLCSSGKDRSPIWPEFSPSHYQIDNPESLLELLSKKFSVERK
LDQLYIYAHLIHDQDITNPEGESDYQSIVYLYTLFSQEISWIQPALIALSEEKVAALLSSSVLAPYRFYLEKIFRLSPHT
GTANEEKILASSFAALNVSNKAFSSLSDAEIPFGIAKDSNGEEHPLSHALASLYMQSPDQELRRTAYLAQFQRYYDYRNT
FANLLNGKVQAHLFEAKARNYPSCLEASLFQHNIPTTVYINLINETKKHTSLINRYFNLKKEALNLKEFHFYDVYAPISQ
TTSKNYSYEEGVDLVCKSLLPLGTHYVEILRNGLLSNRWVDRYENKHKRSGAYSSGCYDSAPYILLNYTNTLYDVSVIAH
EAGHSMHSYFSREAQPYHDAQYPLFLAEIASTFNEMLLMEALSKSDQSKEDKIVIITKTLDTIFATLFRQTFFAAFEYEI
HSAAEQGTPLTEEFLSATYGNLQKEFYGGVVTSDSLSALEWARIPHFYYNFYVYQYATGIIAALSFAEKILTQEPGALEL
YLKFLKSGRSDFPLNILKKSGLDMTTSAPLDKAFAFITKKIDLLSSLLSED
>Mature_610_residues
TTELKTEALPTRTQVDPKHCWDTTLMYANREEWKKDFDLCSSGKDRSPIWPEFSPSHYQIDNPESLLELLSKKFSVERKL
DQLYIYAHLIHDQDITNPEGESDYQSIVYLYTLFSQEISWIQPALIALSEEKVAALLSSSVLAPYRFYLEKIFRLSPHTG
TANEEKILASSFAALNVSNKAFSSLSDAEIPFGIAKDSNGEEHPLSHALASLYMQSPDQELRRTAYLAQFQRYYDYRNTF
ANLLNGKVQAHLFEAKARNYPSCLEASLFQHNIPTTVYINLINETKKHTSLINRYFNLKKEALNLKEFHFYDVYAPISQT
TSKNYSYEEGVDLVCKSLLPLGTHYVEILRNGLLSNRWVDRYENKHKRSGAYSSGCYDSAPYILLNYTNTLYDVSVIAHE
AGHSMHSYFSREAQPYHDAQYPLFLAEIASTFNEMLLMEALSKSDQSKEDKIVIITKTLDTIFATLFRQTFFAAFEYEIH
SAAEQGTPLTEEFLSATYGNLQKEFYGGVVTSDSLSALEWARIPHFYYNFYVYQYATGIIAALSFAEKILTQEPGALELY
LKFLKSGRSDFPLNILKKSGLDMTTSAPLDKAFAFITKKIDLLSSLLSED

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69866; Mature: 69735

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTELKTEALPTRTQVDPKHCWDTTLMYANREEWKKDFDLCSSGKDRSPIWPEFSPSHYQ
CCCCCCCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IDNPESLLELLSKKFSVERKLDQLYIYAHLIHDQDITNPEGESDYQSIVYLYTLFSQEIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WIQPALIALSEEKVAALLSSSVLAPYRFYLEKIFRLSPHTGTANEEKILASSFAALNVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH
KAFSSLSDAEIPFGIAKDSNGEEHPLSHALASLYMQSPDQELRRTAYLAQFQRYYDYRNT
HHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FANLLNGKVQAHLFEAKARNYPSCLEASLFQHNIPTTVYINLINETKKHTSLINRYFNLK
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KEALNLKEFHFYDVYAPISQTTSKNYSYEEGVDLVCKSLLPLGTHYVEILRNGLLSNRWV
HHHCCHHHEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRYENKHKRSGAYSSGCYDSAPYILLNYTNTLYDVSVIAHEAGHSMHSYFSREAQPYHDA
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
QYPLFLAEIASTFNEMLLMEALSKSDQSKEDKIVIITKTLDTIFATLFRQTFFAAFEYEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
HSAAEQGTPLTEEFLSATYGNLQKEFYGGVVTSDSLSALEWARIPHFYYNFYVYQYATGI
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
IAALSFAEKILTQEPGALELYLKFLKSGRSDFPLNILKKSGLDMTTSAPLDKAFAFITKK
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
IDLLSSLLSED
HHHHHHHHCCC
>Mature Secondary Structure 
TTELKTEALPTRTQVDPKHCWDTTLMYANREEWKKDFDLCSSGKDRSPIWPEFSPSHYQ
CCCCCCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IDNPESLLELLSKKFSVERKLDQLYIYAHLIHDQDITNPEGESDYQSIVYLYTLFSQEIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
WIQPALIALSEEKVAALLSSSVLAPYRFYLEKIFRLSPHTGTANEEKILASSFAALNVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCH
KAFSSLSDAEIPFGIAKDSNGEEHPLSHALASLYMQSPDQELRRTAYLAQFQRYYDYRNT
HHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FANLLNGKVQAHLFEAKARNYPSCLEASLFQHNIPTTVYINLINETKKHTSLINRYFNLK
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KEALNLKEFHFYDVYAPISQTTSKNYSYEEGVDLVCKSLLPLGTHYVEILRNGLLSNRWV
HHHCCHHHEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRYENKHKRSGAYSSGCYDSAPYILLNYTNTLYDVSVIAHEAGHSMHSYFSREAQPYHDA
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
QYPLFLAEIASTFNEMLLMEALSKSDQSKEDKIVIITKTLDTIFATLFRQTFFAAFEYEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
HSAAEQGTPLTEEFLSATYGNLQKEFYGGVVTSDSLSALEWARIPHFYYNFYVYQYATGI
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
IAALSFAEKILTQEPGALELYLKFLKSGRSDFPLNILKKSGLDMTTSAPLDKAFAFITKK
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
IDLLSSLLSED
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]