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The map label for this gene is pmp_4_1_2

Identifier: 15835553

GI number: 15835553

Start: 25374

End: 25862

Strand: Direct

Name: pmp_4_1_2

Synonym: CPj0016B

Alternate gene names: 15835553

Gene position: 25374-25862 (Clockwise)

Preceding gene: 15835552

Following gene: 15835554

Centisome position: 2.07

GC content: 43.15

Gene sequence:

>489_bases
CTGAAGTCTACATTTACACAGGCTGTAGAGCTTGCTGCAGGTGCCTTAGTATTGAAAGATGGAGTGACTGTAGTTGCAAA
TACTATAACGCAGGTCGAGGGATCGAAAGTCGTTATGGATGGAGGGACTACTTTTGAGGCAAGCGCTGAGGGGGTCACTC
TCAATGGCCTAGCCATTAATATAGATTCCTTAGATGGGACAAATAAAGCTATCATTAAGGCGACGGCAGCAAGTAAGGAT
GTTGCCTTATCAGGGCCTATCATGCTTGTAGATGCTCAGGGGAACTATTATGAGCATCATAATCTCAGTCAACAGCAGGT
CTTTCCTTTAATAGAGCTTTCTGCACAAGGAACGATGACTACTACAGATATCCCCGATACCCCAATTCTAAATACTACGA
ATCACTATGGGTATCAAGGGAACTGGAATAATTGTTTGGGTCGACGATGCAACTGCAAAAACAAAAAATGCTACCTTAAC
TTGGACTAA

Upstream 100 bases:

>100_bases
AGCTCTCTTTGAATAAAGCTGACGCAGGATCTGGAAATACCTATGAAGGCTACATCGTTTTCTCTGGAGAGAAACTCTCA
GAAGTAAGAAACCTGACAAT

Downstream 100 bases:

>100_bases
AACAGGATACAAGCCGAATCCAGAACGTCAGGGACCTTTGGGTCCTAATAGCCTGTGGGGTTCTTTTGTCGATGTCCGCT
CCATTCAGAGCCTCATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein 5; Polymorphic membrane protein 10 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKSTFTQAVELAAGALVLKDGVTVVANTITQVEGSKVVMDGGTTFEASAEGVTLNGLAINIDSLDGTNKAIIKATAASKD
VALSGPIMLVDAQGNYYEHHNLSQQQVFPLIELSAQGTMTTTDIPDTPILNTTNHYGYQGNWNNCLGRRCNCKNKKCYLN
LD

Sequences:

>Translated_162_residues
MKSTFTQAVELAAGALVLKDGVTVVANTITQVEGSKVVMDGGTTFEASAEGVTLNGLAINIDSLDGTNKAIIKATAASKD
VALSGPIMLVDAQGNYYEHHNLSQQQVFPLIELSAQGTMTTTDIPDTPILNTTNHYGYQGNWNNCLGRRCNCKNKKCYLN
LD
>Mature_162_residues
MKSTFTQAVELAAGALVLKDGVTVVANTITQVEGSKVVMDGGTTFEASAEGVTLNGLAINIDSLDGTNKAIIKATAASKD
VALSGPIMLVDAQGNYYEHHNLSQQQVFPLIELSAQGTMTTTDIPDTPILNTTNHYGYQGNWNNCLGRRCNCKNKKCYLN
LD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR006626
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 17284; Mature: 17284

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTFTQAVELAAGALVLKDGVTVVANTITQVEGSKVVMDGGTTFEASAEGVTLNGLAIN
CCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCEEEEECCCEEECCCCCEEECCEEEE
IDSLDGTNKAIIKATAASKDVALSGPIMLVDAQGNYYEHHNLSQQQVFPLIELSAQGTMT
EECCCCCCEEEEEEECCCCCEEEECCEEEEECCCCEEECCCCCHHHCCEEEEECCCCCEE
TTDIPDTPILNTTNHYGYQGNWNNCLGRRCNCKNKKCYLNLD
ECCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKSTFTQAVELAAGALVLKDGVTVVANTITQVEGSKVVMDGGTTFEASAEGVTLNGLAIN
CCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCEEEEECCCEEECCCCCEEECCEEEE
IDSLDGTNKAIIKATAASKDVALSGPIMLVDAQGNYYEHHNLSQQQVFPLIELSAQGTMT
EECCCCCCEEEEEEECCCCCEEEECCEEEEECCCCEEECCCCCHHHCCEEEEECCCCCEE
TTDIPDTPILNTTNHYGYQGNWNNCLGRRCNCKNKKCYLNLD
ECCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10539856; 10684935; 10871362; 9864239 [H]