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The map label for this gene is pmp_4_1

Identifier: 15835552

GI number: 15835552

Start: 24094

End: 25377

Strand: Direct

Name: pmp_4_1

Synonym: CPj0016A

Alternate gene names: 15835552

Gene position: 24094-25377 (Clockwise)

Preceding gene: 15835551

Following gene: 15835553

Centisome position: 1.96

GC content: 43.07

Gene sequence:

>1284_bases
ATGAGATCGTCTTTTTCCTTGTTATTAATATCTTCATCTCTAGCCTTTCCTCTCTTAATGAGTGTTTCTGCAGATGCTGC
CGATCTCACATTAGGGAGTCGTGACAGTTATAATGGTGATACAAGCACCACAGAATTTACTCCTAAAGCGGCAACTTCTG
ATGCTAGTGGCACGACCTATATTCTCGATGGGGATGTCTCGATAAGCCAAGCAGGGAAACAAACGAGCTTAACCACAAGT
TGTTTTTCTAACACTGCAGGAAATCTTACCTTCTTAGGGAACGGATTTTCTCTTCATTTTGACAATATTATTTCGTCTAC
TGTTGCAGGTGTTGTTGTTAGCAATACAGCAGCTTCTGGGATTACGAAATTCTCAGGATTTTCAACTCTTCGGATGCTTG
CAGCTCCTAGGACCACAGGTAAAGGAGCCATTAAAATTACCGATGGTCTGGTGTTTGAGAGTATAGGGAATCTTGATCTT
AATGAAAATGCCTCTAGTGAAAATGGGGGAGCCATCAATACGAAGACTTTGTCTTTGACTGGGAGTACGCGGTTTGTAGC
GTTCCTTGGCAATAGCTCGTCGCAACAAGGGGGAGCGATCTATGCTTCTGGTGACTCTGTGATTTCTGAGAATGCAGGAA
TCTTGAGCTTCGGAAACAACAGTGCGACAACATCAGGAGGCGCGATCTCTGCTGAAGGGAACCTTGTGATCTCCAATAAC
CAAAATATCTTTTTCGATGGCTGCAAAGCAACTACAAATGGCGGAGCTATTGATTGTAACAAAGCAGGGGCGAACCCAGA
CCCTATCTTGACTCTTTCAGGAAATGAGAGCCTGCATTTTCTGAATAACACAGCAGGAAATAGTGGAGGTGCGATTTATA
CCAAAAAATTGGTGTTATCCTCAGGACGAGGAGGAGTGTTATTTTCTAACAACAAAGCTGCGAATGCTACTCCTAAAGGA
GGGGCAATTGCGATTCTAGATTCTGGAGAGATTAGCATTTCTGCAGATCTCGGCAATATCATTTTCGAGGGCAATACTAC
GAGCACTACAGGAAGTCCTGCGAGTGTGACCAGAAATGCTATAGATCTTGCATCGAATGCAAAATTTTTAAATCTCCGAG
CGACTCGGGGAAATAAAGTTATTTTCTATGATCCTATCACGAGCTCAGGAGCTACTGATAAGCTCTCTTTGAATAAAGCT
GACGCAGGATCTGGAAATACCTATGAAGGCTACATCGTTTTCTCTGGAGAGAAACTCTCAGAAGTAAGAAACCTGACAAT
CTGA

Upstream 100 bases:

>100_bases
TTGAAAAAAAGAGAGTTACGGCAGCTGTAAAGTTTTTAATATTGCTCCCTTTGTTCCATTTATGTAGCGTTCAGACTTTG
CACTAAAACGAGGGTGTCAT

Downstream 100 bases:

>100_bases
AGTCTACATTTACACAGGCTGTAGAGCTTGCTGCAGGTGCCTTAGTATTGAAAGATGGAGTGACTGTAGTTGCAAATACT
ATAACGCAGGTCGAGGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein 11; Polymorphic membrane protein 8 [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRSSFSLLLISSSLAFPLLMSVSADAADLTLGSRDSYNGDTSTTEFTPKAATSDASGTTYILDGDVSISQAGKQTSLTTS
CFSNTAGNLTFLGNGFSLHFDNIISSTVAGVVVSNTAASGITKFSGFSTLRMLAAPRTTGKGAIKITDGLVFESIGNLDL
NENASSENGGAINTKTLSLTGSTRFVAFLGNSSSQQGGAIYASGDSVISENAGILSFGNNSATTSGGAISAEGNLVISNN
QNIFFDGCKATTNGGAIDCNKAGANPDPILTLSGNESLHFLNNTAGNSGGAIYTKKLVLSSGRGGVLFSNNKAANATPKG
GAIAILDSGEISISADLGNIIFEGNTTSTTGSPASVTRNAIDLASNAKFLNLRATRGNKVIFYDPITSSGATDKLSLNKA
DAGSGNTYEGYIVFSGEKLSEVRNLTI

Sequences:

>Translated_427_residues
MRSSFSLLLISSSLAFPLLMSVSADAADLTLGSRDSYNGDTSTTEFTPKAATSDASGTTYILDGDVSISQAGKQTSLTTS
CFSNTAGNLTFLGNGFSLHFDNIISSTVAGVVVSNTAASGITKFSGFSTLRMLAAPRTTGKGAIKITDGLVFESIGNLDL
NENASSENGGAINTKTLSLTGSTRFVAFLGNSSSQQGGAIYASGDSVISENAGILSFGNNSATTSGGAISAEGNLVISNN
QNIFFDGCKATTNGGAIDCNKAGANPDPILTLSGNESLHFLNNTAGNSGGAIYTKKLVLSSGRGGVLFSNNKAANATPKG
GAIAILDSGEISISADLGNIIFEGNTTSTTGSPASVTRNAIDLASNAKFLNLRATRGNKVIFYDPITSSGATDKLSLNKA
DAGSGNTYEGYIVFSGEKLSEVRNLTI
>Mature_427_residues
MRSSFSLLLISSSLAFPLLMSVSADAADLTLGSRDSYNGDTSTTEFTPKAATSDASGTTYILDGDVSISQAGKQTSLTTS
CFSNTAGNLTFLGNGFSLHFDNIISSTVAGVVVSNTAASGITKFSGFSTLRMLAAPRTTGKGAIKITDGLVFESIGNLDL
NENASSENGGAINTKTLSLTGSTRFVAFLGNSSSQQGGAIYASGDSVISENAGILSFGNNSATTSGGAISAEGNLVISNN
QNIFFDGCKATTNGGAIDCNKAGANPDPILTLSGNESLHFLNNTAGNSGGAIYTKKLVLSSGRGGVLFSNNKAANATPKG
GAIAILDSGEISISADLGNIIFEGNTTSTTGSPASVTRNAIDLASNAKFLNLRATRGNKVIFYDPITSSGATDKLSLNKA
DAGSGNTYEGYIVFSGEKLSEVRNLTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 43419; Mature: 43419

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSFSLLLISSSLAFPLLMSVSADAADLTLGSRDSYNGDTSTTEFTPKAATSDASGTTY
CCCCEEEEEEECCCCCEEEEECCCCHHEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEE
ILDGDVSISQAGKQTSLTTSCFSNTAGNLTFLGNGFSLHFDNIISSTVAGVVVSNTAASG
EEECCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHEEEEECCCCCC
ITKFSGFSTLRMLAAPRTTGKGAIKITDGLVFESIGNLDLNENASSENGGAINTKTLSLT
CCHHCCCCEEEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE
GSTRFVAFLGNSSSQQGGAIYASGDSVISENAGILSFGNNSATTSGGAISAEGNLVISNN
CCEEEEEEECCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCCEEECCCCEEEECC
QNIFFDGCKATTNGGAIDCNKAGANPDPILTLSGNESLHFLNNTAGNSGGAIYTKKLVLS
CEEEEECCEECCCCCEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
SGRGGVLFSNNKAANATPKGGAIAILDSGEISISADLGNIIFEGNTTSTTGSPASVTRNA
CCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCEEECCCCCCCCCCCHHHHHHH
IDLASNAKFLNLRATRGNKVIFYDPITSSGATDKLSLNKADAGSGNTYEGYIVFSGEKLS
HHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCHHH
EVRNLTI
HHHCCCC
>Mature Secondary Structure
MRSSFSLLLISSSLAFPLLMSVSADAADLTLGSRDSYNGDTSTTEFTPKAATSDASGTTY
CCCCEEEEEEECCCCCEEEEECCCCHHEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEE
ILDGDVSISQAGKQTSLTTSCFSNTAGNLTFLGNGFSLHFDNIISSTVAGVVVSNTAASG
EEECCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHEEEEECCCCCC
ITKFSGFSTLRMLAAPRTTGKGAIKITDGLVFESIGNLDLNENASSENGGAINTKTLSLT
CCHHCCCCEEEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE
GSTRFVAFLGNSSSQQGGAIYASGDSVISENAGILSFGNNSATTSGGAISAEGNLVISNN
CCEEEEEEECCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCCEEECCCCEEEECC
QNIFFDGCKATTNGGAIDCNKAGANPDPILTLSGNESLHFLNNTAGNSGGAIYTKKLVLS
CEEEEECCEECCCCCEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
SGRGGVLFSNNKAANATPKGGAIAILDSGEISISADLGNIIFEGNTTSTTGSPASVTRNA
CCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCEEECCCCCCCCCCCHHHHHHH
IDLASNAKFLNLRATRGNKVIFYDPITSSGATDKLSLNKADAGSGNTYEGYIVFSGEKLS
HHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCHHH
EVRNLTI
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10539856; 10192388; 10684935; 10871362 [H]