| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is cht60 [H]
Identifier: 15594965
GI number: 15594965
Start: 646659
End: 648326
Strand: Reverse
Name: cht60 [H]
Synonym: BB0620
Alternate gene names: 15594965
Gene position: 648326-646659 (Counterclockwise)
Preceding gene: 15594967
Following gene: 15594963
Centisome position: 71.19
GC content: 26.26
Gene sequence:
>1668_bases ATGAAAAGAAATTTTTATCTCATTGTCCTTTTTATAGCTAATAACTGCTTTTCTATTGATTTTTGGGATACGATGGAAAG AGAAAAATTAATAAATGAAATGGTAAGCAAAATGCAAGATCATGAATTACTGGGGCAAATGTTCATGATAAGCTACCCAA ATCAATCAATCACAAATTTTGTTCTTGATTTTATAAGTAAAAAAAATCTTGGGGGAATTAAAATTTTTGGATGGAACGCA AAAGATTTAAAAAATTTAACAGAAAGTATTCATAAAGCTCAAAAAACATCTCAAAATAATAAATTTAAAATTCCTTTATT TGTAGCAACAGATCAAGAAGGGGGATTGGCGCAGCACATAAAATTAAATACATCAGAAACAATTGGCAATCTTGGAATTG CAGCATCGCTTTCTCCAAAAGATTCTTATAATACAGGATATTACATAGCACAAGAGCTAAGGCAACTTGGAATAAATCTA AACTTTGCGCCCATAGTAGATATATACAGCCATGAAAATAATTTTGCAATAGGACCAAGAACATATTCGGATAACCCCAA AATAGTATCACTTCTTTCTCTGGCCTTTTATAAAGGACAAAAGCAAGGAGGAGTAATTTCTACTGCAAAACATTTCCCAG GACACGGCAATACCACTCTTGACTCTCATATCAATATTCCAATAATAAATTCTAATTTACTAGAAATAAGCTTAAATGAA CTTTTACCATATAAAATATTAATCCAAGAAAACATCCCCGTAATAATGACAGGTCATTTAGCATATCCAAAGCTTACAAA TGGAGAAAATATTCCTGCATCATCCTCAATAAAAATAATTAAAGACATACTTAGAAAAAAATTAAAATATAATAACATAA TAATTACTGATGACCTATTAATGAACGCAGTAAACTACAATAATGAGAGCATTTATAATACGATTGAAAGAATAGTTAGA ACCAAAAGTGACATTTTTTTAATATCTTTAAATGAAAATATACAACAAAATGCTTACAACATGCTATTAAATTTAATGAA AAAAGATTCAGAAATAAAAAACAATATTATTGAATCTAATAAAAGAATATTAAGAATAAAATTAATGTACTTAAAAGAAA ATAAAAATAAATCTGATCTTTATCCTAATTTAAACAAAAATGAGAAAATATATTCAAAAGAAGGTGAAAAATTTTTTGAA CAAAACACATTAAGGAGTATTACAAAAGTAAGAATAGAAAAAGAAATATCTAAAACCAAAAAAACACTTATAATATCTCC TTACTACAAAATGATTGTAGAGGGTAAAAAAATATTTCAAAATACATACGCTTATTATTACAACTATTATCCCTTAAACG GAATTAATCCCCAAAAACTCGACGAAATTAAAAAATTAATTAATAAATTTGAACAAGTAATATTTAATTTATCCACACCT GGAAGCTTGAAATATTTAGAAAATTTGAAAGAATACAAAGACAAAATAAGCGTAATTGTATCTCTTACTCCTCACCATAT TAAAAAATTAAATTGGATAAAAAACATAGTAATTATTTATGGAACAACACCCTTGGCATTTAAATCTGGATTTTTAACAC TCACTAAAGATTTTGATCCAAAAGGAACCATCCCTTTAAAAAATATTATAAATAAATATTATCCTTAA
Upstream 100 bases:
>100_bases TCAATGTTATTATTCAAAAGTATTATTATAAAGTATAATACAAAATGGCTTGCTAATAAATATAAATTACTAAATTAGCA TTTATTATTTATATGGTTAA
Downstream 100 bases:
>100_bases TGTATGCTAGCATTCGATTTTTTACAATCTCTAGAGAACCTTGTTTGATTCTAAACCCACTGGCATTTTTATGCCCACCG CCTCCAAAATCTTCTGCCAA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; Chitobiase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MKRNFYLIVLFIANNCFSIDFWDTMEREKLINEMVSKMQDHELLGQMFMISYPNQSITNFVLDFISKKNLGGIKIFGWNA KDLKNLTESIHKAQKTSQNNKFKIPLFVATDQEGGLAQHIKLNTSETIGNLGIAASLSPKDSYNTGYYIAQELRQLGINL NFAPIVDIYSHENNFAIGPRTYSDNPKIVSLLSLAFYKGQKQGGVISTAKHFPGHGNTTLDSHINIPIINSNLLEISLNE LLPYKILIQENIPVIMTGHLAYPKLTNGENIPASSSIKIIKDILRKKLKYNNIIITDDLLMNAVNYNNESIYNTIERIVR TKSDIFLISLNENIQQNAYNMLLNLMKKDSEIKNNIIESNKRILRIKLMYLKENKNKSDLYPNLNKNEKIYSKEGEKFFE QNTLRSITKVRIEKEISKTKKTLIISPYYKMIVEGKKIFQNTYAYYYNYYPLNGINPQKLDEIKKLINKFEQVIFNLSTP GSLKYLENLKEYKDKISVIVSLTPHHIKKLNWIKNIVIIYGTTPLAFKSGFLTLTKDFDPKGTIPLKNIINKYYP
Sequences:
>Translated_555_residues MKRNFYLIVLFIANNCFSIDFWDTMEREKLINEMVSKMQDHELLGQMFMISYPNQSITNFVLDFISKKNLGGIKIFGWNA KDLKNLTESIHKAQKTSQNNKFKIPLFVATDQEGGLAQHIKLNTSETIGNLGIAASLSPKDSYNTGYYIAQELRQLGINL NFAPIVDIYSHENNFAIGPRTYSDNPKIVSLLSLAFYKGQKQGGVISTAKHFPGHGNTTLDSHINIPIINSNLLEISLNE LLPYKILIQENIPVIMTGHLAYPKLTNGENIPASSSIKIIKDILRKKLKYNNIIITDDLLMNAVNYNNESIYNTIERIVR TKSDIFLISLNENIQQNAYNMLLNLMKKDSEIKNNIIESNKRILRIKLMYLKENKNKSDLYPNLNKNEKIYSKEGEKFFE QNTLRSITKVRIEKEISKTKKTLIISPYYKMIVEGKKIFQNTYAYYYNYYPLNGINPQKLDEIKKLINKFEQVIFNLSTP GSLKYLENLKEYKDKISVIVSLTPHHIKKLNWIKNIVIIYGTTPLAFKSGFLTLTKDFDPKGTIPLKNIINKYYP >Mature_555_residues MKRNFYLIVLFIANNCFSIDFWDTMEREKLINEMVSKMQDHELLGQMFMISYPNQSITNFVLDFISKKNLGGIKIFGWNA KDLKNLTESIHKAQKTSQNNKFKIPLFVATDQEGGLAQHIKLNTSETIGNLGIAASLSPKDSYNTGYYIAQELRQLGINL NFAPIVDIYSHENNFAIGPRTYSDNPKIVSLLSLAFYKGQKQGGVISTAKHFPGHGNTTLDSHINIPIINSNLLEISLNE LLPYKILIQENIPVIMTGHLAYPKLTNGENIPASSSIKIIKDILRKKLKYNNIIITDDLLMNAVNYNNESIYNTIERIVR TKSDIFLISLNENIQQNAYNMLLNLMKKDSEIKNNIIESNKRILRIKLMYLKENKNKSDLYPNLNKNEKIYSKEGEKFFE QNTLRSITKVRIEKEISKTKKTLIISPYYKMIVEGKKIFQNTYAYYYNYYPLNGINPQKLDEIKKLINKFEQVIFNLSTP GSLKYLENLKEYKDKISVIVSLTPHHIKKLNWIKNIVIIYGTTPLAFKSGFLTLTKDFDPKGTIPLKNIINKYYP
Specific function: Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=244, Percent_Identity=31.1475409836066, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 63965; Mature: 63965
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNFYLIVLFIANNCFSIDFWDTMEREKLINEMVSKMQDHELLGQMFMISYPNQSITNF CCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHH VLDFISKKNLGGIKIFGWNAKDLKNLTESIHKAQKTSQNNKFKIPLFVATDQEGGLAQHI HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEE KLNTSETIGNLGIAASLSPKDSYNTGYYIAQELRQLGINLNFAPIVDIYSHENNFAIGPR EECCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCC TYSDNPKIVSLLSLAFYKGQKQGGVISTAKHFPGHGNTTLDSHINIPIINSNLLEISLNE CCCCCCHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCEECCCEEEEEECCCEEEEEHHH LLPYKILIQENIPVIMTGHLAYPKLTNGENIPASSSIKIIKDILRKKLKYNNIIITDDLL CCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH MNAVNYNNESIYNTIERIVRTKSDIFLISLNENIQQNAYNMLLNLMKKDSEIKNNIIESN HHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCC KRILRIKLMYLKENKNKSDLYPNLNKNEKIYSKEGEKFFEQNTLRSITKVRIEKEISKTK CEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTLIISPYYKMIVEGKKIFQNTYAYYYNYYPLNGINPQKLDEIKKLINKFEQVIFNLSTP HEEEECHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCC GSLKYLENLKEYKDKISVIVSLTPHHIKKLNWIKNIVIIYGTTPLAFKSGFLTLTKDFDP CHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCEEEEECCCCHHHCCCCEEEEECCCC KGTIPLKNIINKYYP CCCCCHHHHHHHCCC >Mature Secondary Structure MKRNFYLIVLFIANNCFSIDFWDTMEREKLINEMVSKMQDHELLGQMFMISYPNQSITNF CCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHH VLDFISKKNLGGIKIFGWNAKDLKNLTESIHKAQKTSQNNKFKIPLFVATDQEGGLAQHI HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEE KLNTSETIGNLGIAASLSPKDSYNTGYYIAQELRQLGINLNFAPIVDIYSHENNFAIGPR EECCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCC TYSDNPKIVSLLSLAFYKGQKQGGVISTAKHFPGHGNTTLDSHINIPIINSNLLEISLNE CCCCCCHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCEECCCEEEEEECCCEEEEEHHH LLPYKILIQENIPVIMTGHLAYPKLTNGENIPASSSIKIIKDILRKKLKYNNIIITDDLL CCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH MNAVNYNNESIYNTIERIVRTKSDIFLISLNENIQQNAYNMLLNLMKKDSEIKNNIIESN HHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCC KRILRIKLMYLKENKNKSDLYPNLNKNEKIYSKEGEKFFEQNTLRSITKVRIEKEISKTK CEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTLIISPYYKMIVEGKKIFQNTYAYYYNYYPLNGINPQKLDEIKKLINKFEQVIFNLSTP HEEEECHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCC GSLKYLENLKEYKDKISVIVSLTPHHIKKLNWIKNIVIIYGTTPLAFKSGFLTLTKDFDP CHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCEEEEECCCCHHHCCCCEEEEECCCC KGTIPLKNIINKYYP CCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8063094 [H]