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The map label for this gene is yxiD

Identifier: 255767833

GI number: 255767833

Start: 4036784

End: 4038493

Strand: Reverse

Name: yxiD

Synonym: BSU39300

Alternate gene names: 255767833

Gene position: 4038493-4036784 (Counterclockwise)

Preceding gene: 16080982

Following gene: 16080980

Centisome position: 95.8

GC content: 39.01

Gene sequence:

>1710_bases
TTGAAAACATTAGATGTCCACGCTCTTCACGAGGGCATTCAGCATACGATTGAGAAACTGGACAAGCAAAAACAACAGCT
GGAGAAGCTGGAAAAAAGCGTTGAGCATCTGGCAGGCATGAAGGATGCGCTGAAAGGAAAAGGCGGAGATGCCATCCGGA
CCTTTTACGAGGAGTGCCACAAGCCTTTTCTCCTTTTCTTTGGCATATTTATCGACGAATACAAAAAAGTGCTGAAACAA
ACACAGCATGCGATTTCCTCTGTAGAATCTAACTCCCACGGCATGATCGCAGAGGCTTTTCTCTCACACGATGCGAGACA
TGGGGTCAAGCATGCACGAGAAGTGACAGAGCAGCTCACTGACGCAGTCAATCGCCAGACATCAGCCATAGATCACATCG
TCAGCCTGCCGACAGTCAATGATTCCTTTTTTCGGATGGAAACAGAACAGGCTGAGCGGCTGATTTCAGACACCCTGAAT
AAGCTCTTTCAATTTGACGGCCAGCAAACCCAAGCACTAGAAGCCGCAAAATCAGATTTTCAAACGATGAAAAAATACAT
TGATCAGCTCGAAACCATGTACACCGGCCCGAAAATTGAAATCACAGGCTACAAAAGCGGCTCCATCCTGAAATCACAGG
AAGAAGAAAACATCAACCAAATCTTCGGCGCGATTAACCCGCAAATGAAGCAGGCGGATGATTCACCGATGGAGATGATG
CTGAAGAAATTAGCCGAGAATGAAAAGTCTAAAGTGGATTCAGTTGTCAAAACGGGTGATTCTAAAAAGGTAAGTAAAAA
TATCATCGTTATCAATGGTAAAGTGTATAATACGAGTGAACATAGAGAACATATAAAAACTGATTTCTCAAATGCAGAGG
TTAAGCAAGTCGTTTATAATGATACACTTTACAATGTATACATATCTGGTAATGACATGAAGCTTGAACCTGTCGTCTCG
CTTTCGGACATTAAAGTGGATGAGAATGGATATGTGAAAATTTTAGAGACGGCTGTAGAACTTACCGGCGTGTATGATCT
ATTTAAAGCAGCCACGGGCAGAGATCCGGTATCAGGCGAAAAAGTCACAGGGAAAGACCGTGTTGTTGCCTCCATAAACT
CAGTACCATTTGCCAAAATAGCTAAGTTAGAAAAGTTAATAGATATTAATAAACTTATTAATAATGGGAAAAAGGCTAAG
AAGGCTTCGGAAGTTAAAAACGTTGCTAAGGATAAAGGGAAAATTGCGAATGATGTAAGTGGATCTGCTAATAAAATTAA
TTCTGATTTAATAAAAAAGTATGCTAGAGATATAGAACAACGCACAGGTAGAGAATTACCTAAAAATCAAATAGATAAAT
TAAAGGAAGCATTAAGAAATAAAGAATATAAAAAAATGTCACCAATAGAGACTGCAAAACACAGGACTAAATTTGATAAA
GTAAAAAATAAAGTTATAAAAGAATGGGAAGAAAACACTGGACAAAAATGGCCTGTTTATAAGGAAAATGTTGTATCTGA
AAAAACAGGTAAAATTATTAGAAAAAAAGGGGATAAGTATGATGCTCACCATATAATTGAAAATACTTTTGGCGGAGAAC
ATGAATGGTGGAATATGCATCCAGCAAAATTTCCTAACGAGCATCAAGCTGGGATTCATGGTACAGGCTCACCAGCAAAT
GAATTATTTAAAGGAGGCAAAAAAAAATGA

Upstream 100 bases:

>100_bases
GCCAAGCATATCGCACAAACGGAAAGCGCGGTAAACGCCATGAAGGAAACGGACGAAAACATATCATCTTCCATGAAATA
AAGCGCGGGAGGACAAGGGA

Downstream 100 bases:

>100_bases
GTTATAATTTTATAAAATCAAACAAAGAAAATGATTTTTATCCAGTGAATCAAAGTGAGATTGAAGAGGTTGAAAAAAAT
TTAAACTTAAAATTACCTAG

Product: DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGDAIRTFYEECHKPFLLFFGIFIDEYKKVLKQ
TQHAISSVESNSHGMIAEAFLSHDARHGVKHAREVTEQLTDAVNRQTSAIDHIVSLPTVNDSFFRMETEQAERLISDTLN
KLFQFDGQQTQALEAAKSDFQTMKKYIDQLETMYTGPKIEITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMM
LKKLAENEKSKVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYNDTLYNVYISGNDMKLEPVVS
LSDIKVDENGYVKILETAVELTGVYDLFKAATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAK
KASEVKNVAKDKGKIANDVSGSANKINSDLIKKYARDIEQRTGRELPKNQIDKLKEALRNKEYKKMSPIETAKHRTKFDK
VKNKVIKEWEENTGQKWPVYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMHPAKFPNEHQAGIHGTGSPAN
ELFKGGKKK

Sequences:

>Translated_569_residues
MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGDAIRTFYEECHKPFLLFFGIFIDEYKKVLKQ
TQHAISSVESNSHGMIAEAFLSHDARHGVKHAREVTEQLTDAVNRQTSAIDHIVSLPTVNDSFFRMETEQAERLISDTLN
KLFQFDGQQTQALEAAKSDFQTMKKYIDQLETMYTGPKIEITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMM
LKKLAENEKSKVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYNDTLYNVYISGNDMKLEPVVS
LSDIKVDENGYVKILETAVELTGVYDLFKAATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAK
KASEVKNVAKDKGKIANDVSGSANKINSDLIKKYARDIEQRTGRELPKNQIDKLKEALRNKEYKKMSPIETAKHRTKFDK
VKNKVIKEWEENTGQKWPVYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMHPAKFPNEHQAGIHGTGSPAN
ELFKGGKKK
>Mature_569_residues
MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGDAIRTFYEECHKPFLLFFGIFIDEYKKVLKQ
TQHAISSVESNSHGMIAEAFLSHDARHGVKHAREVTEQLTDAVNRQTSAIDHIVSLPTVNDSFFRMETEQAERLISDTLN
KLFQFDGQQTQALEAAKSDFQTMKKYIDQLETMYTGPKIEITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMM
LKKLAENEKSKVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYNDTLYNVYISGNDMKLEPVVS
LSDIKVDENGYVKILETAVELTGVYDLFKAATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAK
KASEVKNVAKDKGKIANDVSGSANKINSDLIKKYARDIEQRTGRELPKNQIDKLKEALRNKEYKKMSPIETAKHRTKFDK
VKNKVIKEWEENTGQKWPVYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMHPAKFPNEHQAGIHGTGSPAN
ELFKGGKKK

Specific function: Unknown

COG id: COG5444

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0720 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXID_BACSU (P42296)

Other databases:

- EMBL:   D31856
- EMBL:   AL009126
- PIR:   H70076
- RefSeq:   NP_391809.2
- EnsemblBacteria:   EBBACT00000003449
- GeneID:   937523
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39300
- NMPDR:   fig|224308.1.peg.3935
- GenoList:   BSU39300
- GeneTree:   EBGT00050000000259
- ProtClustDB:   CLSK2816791
- BioCyc:   BSUB:BSU39300-MONOMER
- InterPro:   IPR003615
- InterPro:   IPR006829
- SMART:   SM00507

Pfam domain/function: PF04740 Transposase_30

EC number: NA

Molecular weight: Translated: 64327; Mature: 64327

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGDAIRTFYEECH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHC
KPFLLFFGIFIDEYKKVLKQTQHAISSVESNSHGMIAEAFLSHDARHGVKHAREVTEQLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVNRQTSAIDHIVSLPTVNDSFFRMETEQAERLISDTLNKLFQFDGQQTQALEAAKSDF
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTMKKYIDQLETMYTGPKIEITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMM
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHH
LKKLAENEKSKVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYN
HHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECEEECCHHHHHHHHHCCCCHHHHHHHHC
DTLYNVYISGNDMKLEPVVSLSDIKVDENGYVKILETAVELTGVYDLFKAATGRDPVSGE
CEEEEEEECCCCEEECCCEEHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAKKASEVKNVAKDKGKIANDVS
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC
GSANKINSDLIKKYARDIEQRTGRELPKNQIDKLKEALRNKEYKKMSPIETAKHRTKFDK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
VKNKVIKEWEENTGQKWPVYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMH
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC
PAKFPNEHQAGIHGTGSPANELFKGGKKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGDAIRTFYEECH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHC
KPFLLFFGIFIDEYKKVLKQTQHAISSVESNSHGMIAEAFLSHDARHGVKHAREVTEQLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVNRQTSAIDHIVSLPTVNDSFFRMETEQAERLISDTLNKLFQFDGQQTQALEAAKSDF
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTMKKYIDQLETMYTGPKIEITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMM
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHH
LKKLAENEKSKVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYN
HHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECEEECCHHHHHHHHHCCCCHHHHHHHHC
DTLYNVYISGNDMKLEPVVSLSDIKVDENGYVKILETAVELTGVYDLFKAATGRDPVSGE
CEEEEEEECCCCEEECCCEEHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAKKASEVKNVAKDKGKIANDVS
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCC
GSANKINSDLIKKYARDIEQRTGRELPKNQIDKLKEALRNKEYKKMSPIETAKHRTKFDK
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
VKNKVIKEWEENTGQKWPVYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMH
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC
PAKFPNEHQAGIHGTGSPANELFKGGKKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377