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The map label for this gene is yxxD

Identifier: 16080980

GI number: 16080980

Start: 4036344

End: 4036787

Strand: Reverse

Name: yxxD

Synonym: BSU39290

Alternate gene names: 16080980

Gene position: 4036787-4036344 (Counterclockwise)

Preceding gene: 255767833

Following gene: 16080979

Centisome position: 95.76

GC content: 25.45

Gene sequence:

>444_bases
ATGAGTTATAATTTTATAAAATCAAACAAAGAAAATGATTTTTATCCAGTGAATCAAAGTGAGATTGAAGAGGTTGAAAA
AAATTTAAACTTAAAATTACCTAGTGAATTAGTGAATTTTTATTTAGAAGTTGGCTATGGGTTTATTAAAGGATCAGAGT
TTAATACTAATCGCATTTTGGATCCATATTCTGTAAGAGACTTTCGATTGAGGATAAATGACTTTGAATTTTATCCTGAC
ATAGAAATATATGATGAGTTTGAGAATGATAAATTAATATTTTTTGAAGGTAGTGAATCGGCATTAATGTCAATTGAATT
AAATGATAATAATAAAAATCCGATTTACTATTATGATATTCAAATTGCAACTTCTCTTACCGAGTTCTTAAGAAAAATAG
AAGAGAATGATCAGTATTATCTTGATTTATTAGATGATGAATGA

Upstream 100 bases:

>100_bases
GGTGGAATATGCATCCAGCAAAATTTCCTAACGAGCATCAAGCTGGGATTCATGGTACAGGCTCACCAGCAAATGAATTA
TTTAAAGGAGGCAAAAAAAA

Downstream 100 bases:

>100_bases
TTTTAACATTATCCCGTTACCTCTCCCTTAAAGGAGCAAGATGACATGTTATTGATCAATAAACAGAAGGACCCTGTTTT
TCAGTTTTTAGCTGGAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSYNFIKSNKENDFYPVNQSEIEEVEKNLNLKLPSELVNFYLEVGYGFIKGSEFNTNRILDPYSVRDFRLRINDFEFYPD
IEIYDEFENDKLIFFEGSESALMSIELNDNNKNPIYYYDIQIATSLTEFLRKIEENDQYYLDLLDDE

Sequences:

>Translated_147_residues
MSYNFIKSNKENDFYPVNQSEIEEVEKNLNLKLPSELVNFYLEVGYGFIKGSEFNTNRILDPYSVRDFRLRINDFEFYPD
IEIYDEFENDKLIFFEGSESALMSIELNDNNKNPIYYYDIQIATSLTEFLRKIEENDQYYLDLLDDE
>Mature_146_residues
SYNFIKSNKENDFYPVNQSEIEEVEKNLNLKLPSELVNFYLEVGYGFIKGSEFNTNRILDPYSVRDFRLRINDFEFYPDI
EIYDEFENDKLIFFEGSESALMSIELNDNNKNPIYYYDIQIATSLTEFLRKIEENDQYYLDLLDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXXD_BACSU (P40737)

Other databases:

- EMBL:   D29985
- EMBL:   D31856
- EMBL:   X85408
- EMBL:   AL009126
- EMBL:   Z34526
- PIR:   S65579
- RefSeq:   NP_391808.1
- ProteinModelPortal:   P40737
- EnsemblBacteria:   EBBACT00000003181
- GeneID:   937530
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39290
- NMPDR:   fig|224308.1.peg.3934
- GenoList:   BSU39290
- GeneTree:   EBGT00050000002009
- HOGENOM:   HBG341502
- OMA:   SESALMS
- ProtClustDB:   CLSK2752569
- BioCyc:   BSUB:BSU39290-MONOMER
- InterPro:   IPR018958
- SMART:   SM00860

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17665; Mature: 17533

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNFIKSNKENDFYPVNQSEIEEVEKNLNLKLPSELVNFYLEVGYGFIKGSEFNTNRIL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCC
DPYSVRDFRLRINDFEFYPDIEIYDEFENDKLIFFEGSESALMSIELNDNNKNPIYYYDI
CCCCCEEEEEEEECEEECCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEE
QIATSLTEFLRKIEENDQYYLDLLDDE
EEHHHHHHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
SYNFIKSNKENDFYPVNQSEIEEVEKNLNLKLPSELVNFYLEVGYGFIKGSEFNTNRIL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCC
DPYSVRDFRLRINDFEFYPDIEIYDEFENDKLIFFEGSESALMSIELNDNNKNPIYYYDI
CCCCCEEEEEEEECEEECCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEE
QIATSLTEFLRKIEENDQYYLDLLDDE
EEHHHHHHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704263; 8628237; 9384377; 7883710