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The map label for this gene is yxiC

Identifier: 16080982

GI number: 16080982

Start: 4038513

End: 4038782

Strand: Reverse

Name: yxiC

Synonym: BSU39310

Alternate gene names: 16080982

Gene position: 4038782-4038513 (Counterclockwise)

Preceding gene: 16080983

Following gene: 255767833

Centisome position: 95.81

GC content: 43.7

Gene sequence:

>270_bases
ATGGCACAGGAAATTAAAATGGTGTATGACACAGTGAAGCAAGGGCTTTCTCAGCTCAAGAATTCAGCTGAACTCAAGTC
CTCATTGCCCGGTCATCTCTCAGGCAGAAACCATTTGAATGTTGTGAAGTCCATCGAGCAATTAAATAAGGACATCAAAG
AGCTCACTGAAGCATATGCGTCTGTTCTGGCCAAGCATATCGCACAAACGGAAAGCGCGGTAAACGCCATGAAGGAAACG
GACGAAAACATATCATCTTCCATGAAATAA

Upstream 100 bases:

>100_bases
TCCACTCATTAGAGGGCGATGTGTATTCTATAAGACGCCAAATCACGAGGATAGAGCATGAAATAGAGAAGGAAAAACAT
AAAAAGTGAGGTGAGCACAA

Downstream 100 bases:

>100_bases
AGCGCGGGAGGACAAGGGATTGAAAACATTAGATGTCCACGCTCTTCACGAGGGCATTCAGCATACGATTGAGAAACTGG
ACAAGCAAAAACAACAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAQEIKMVYDTVKQGLSQLKNSAELKSSLPGHLSGRNHLNVVKSIEQLNKDIKELTEAYASVLAKHIAQTESAVNAMKET
DENISSSMK

Sequences:

>Translated_89_residues
MAQEIKMVYDTVKQGLSQLKNSAELKSSLPGHLSGRNHLNVVKSIEQLNKDIKELTEAYASVLAKHIAQTESAVNAMKET
DENISSSMK
>Mature_88_residues
AQEIKMVYDTVKQGLSQLKNSAELKSSLPGHLSGRNHLNVVKSIEQLNKDIKELTEAYASVLAKHIAQTESAVNAMKETD
ENISSSMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXIC_BACSU (P42295)

Other databases:

- EMBL:   D31856
- EMBL:   AL009126
- PIR:   G70076
- RefSeq:   NP_391810.1
- EnsemblBacteria:   EBBACT00000003795
- GeneID:   937521
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39310
- NMPDR:   fig|224308.1.peg.3936
- GenoList:   BSU39310
- GeneTree:   EBGT00050000006434
- HOGENOM:   HBG345323
- OMA:   IAQTESA
- ProtClustDB:   CLSK888148
- BioCyc:   BSUB:BSU39310-MONOMER
- InterPro:   IPR020315
- ProDom:   PD063106

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9800; Mature: 9669

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEIKMVYDTVKQGLSQLKNSAELKSSLPGHLSGRNHLNVVKSIEQLNKDIKELTEAYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVLAKHIAQTESAVNAMKETDENISSSMK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQEIKMVYDTVKQGLSQLKNSAELKSSLPGHLSGRNHLNVVKSIEQLNKDIKELTEAYA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVLAKHIAQTESAVNAMKETDENISSSMK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377