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The map label for this gene is ywoC

Identifier: 255767785

GI number: 255767785

Start: 3755291

End: 3755860

Strand: Reverse

Name: ywoC

Synonym: BSU36490

Alternate gene names: 255767785

Gene position: 3755860-3755291 (Counterclockwise)

Preceding gene: 16080703

Following gene: 16080701

Centisome position: 89.09

GC content: 47.19

Gene sequence:

>570_bases
ATGATGAATACACTCAACATTGATTTTCAAAAAACAGCATTGGTTATCATTGATTTACAAAAGGGAATTGTGCCGATTGA
TCAAAGCGGCCAGGTTGTCCCGAACGCGAAAAAGCTCGTAGATGAATTTCGGAAACATAACGGGTTCATCAGCTTTGTAA
ATGTAGCCTTTCATGATGGAGCGGACGCCCTGAAGCCGCAAACGGATGAGCCTGCGCAGGGAGGTTCAGGGGAAATGCCG
GCGGACTGGGCCGAATTTGTTCCGGAAATCGGTGTGCAGGATGGCGATTATACTGTGACAAAACGGCAATGGGGTGCTTT
TTTTGGCACAGATTTAGACTTGCAGCTGAGACGTCGCGGCATTGATACGATTGTATTGTGCGGCATCGCAACGAATATCG
GGGTGGAAAGCACAGCACGGGAGGCATTTCAGCTTGGCTATCAGCAGATTTTTATTACAGATGCCATGTCCACATTTAGC
GATGAAGAGCATGAAGCCACACTGCGCTTTATTTTCCCGAGAATCGGTAAATCGCGGACAACGGAAGAGTTTCTGGAACA
AGTGAAATGA

Upstream 100 bases:

>100_bases
GCTCCTTCTGAGAATTTCACAAGCATCATAAAAGAACTTAGGCAGTGTGAAGAGTAAAATATGCAATGTGAGAAACACTA
ACAGTATCAGGAGGAGACGT

Downstream 100 bases:

>100_bases
TGTTATCGAAAAAAAGCCGAGCTGTTTTTTTAACAGCTGTGGCTTCGGGAACAATGCTGAATCCGCTGAACTCGTCTATG
ATCTCTCTTGCGCTCCATAG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHDGADALKPQTDEPAQGGSGEMP
ADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFS
DEEHEATLRFIFPRIGKSRTTEEFLEQVK

Sequences:

>Translated_189_residues
MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHDGADALKPQTDEPAQGGSGEMP
ADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFS
DEEHEATLRFIFPRIGKSRTTEEFLEQVK
>Mature_189_residues
MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHDGADALKPQTDEPAQGGSGEMP
ADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFS
DEEHEATLRFIFPRIGKSRTTEEFLEQVK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family

Homologues:

Organism=Escherichia coli, GI87081992, Length=189, Percent_Identity=46.031746031746, Blast_Score=167, Evalue=3e-43,
Organism=Escherichia coli, GI87081820, Length=155, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786811, Length=187, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWOC_BACSU (P94573)

Other databases:

- EMBL:   Z82987
- EMBL:   AL009126
- PIR:   F70064
- RefSeq:   NP_391530.2
- ProteinModelPortal:   P94573
- SMR:   P94573
- EnsemblBacteria:   EBBACT00000002737
- GeneID:   936934
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36490
- NMPDR:   fig|224308.1.peg.3656
- GenoList:   BSU36490
- GeneTree:   EBGT00050000000752
- HOGENOM:   HBG752434
- PhylomeDB:   P94573
- ProtClustDB:   CLSK2793895
- BioCyc:   BSUB:BSU36490-MONOMER
- InterPro:   IPR016291
- InterPro:   IPR000868
- Gene3D:   G3DSA:3.40.50.850
- PRINTS:   PR01398

Pfam domain/function: PF00857 Isochorismatase; SSF52499 Iscrsm_hydrolase

EC number: NA

Molecular weight: Translated: 21088; Mature: 21088

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHDG
CCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECC
ADALKPQTDEPAQGGSGEMPADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCCCHHHHHHCC
IDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFSDEEHEATLRFIFPRIGKSRT
CCEEEEEEECCCCCCCHHHHHHHHHCHHHEEEHHHHHHCCCCCHHHHHHHEEHHCCCCCC
TEEFLEQVK
HHHHHHHCC
>Mature Secondary Structure
MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHDG
CCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECC
ADALKPQTDEPAQGGSGEMPADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCCCHHHHHHCC
IDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFSDEEHEATLRFIFPRIGKSRT
CCEEEEEEECCCCCCCHHHHHHHHHCHHHEEEHHHHHHCCCCCHHHHHHHEEHHCCCCCC
TEEFLEQVK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377