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The map label for this gene is ywoB

Identifier: 16080703

GI number: 16080703

Start: 3756044

End: 3756508

Strand: Reverse

Name: ywoB

Synonym: BSU36500

Alternate gene names: 16080703

Gene position: 3756508-3756044 (Counterclockwise)

Preceding gene: 16080707

Following gene: 255767785

Centisome position: 89.11

GC content: 46.45

Gene sequence:

>465_bases
ATGATGAATAAAGGCGGCAGGCTGAGGAAAGCGGTACGCAAGTCGATTCCCGCGACGTTCCGATTGTTTTTAGCCTTTAA
TTTTTTCGTGTACGGTCTGGCGAAAGTGGTAATTGGCCAGTTTGGCGAGGTGACGCCTGAAATCGAGGCGGCTGCCGGGA
AGGGGTTTACGATCGCGTGGACATTTTTCGGTTATTCTCATGTCTATGAACTGTTTATAGGTTTTGGTGAAATCCTGGCA
GCTGTTTTATTACTGATTCCGCGAACGGCTGCATTAGGGGCGGTTATTTTTATGCCCATTATTGTGAACATCGTCTTGAT
TAACTATTGTTTTGATATTGGCGTGCAGGATCTTAGCACGATATTAATGGTTATGTGTCTTATCCTGCTTTGGATGGACC
GCCGCAAATTCATGGGCATTTTCAGGCAGGAACCGATAGACAGCAGGCAGGTGATGAAGCGATGA

Upstream 100 bases:

>100_bases
AAGAAACTATTCATATGAGCTGAAAAGGGAATTGACATTAATTAGAATACTCTATACTGTATTAAGTGTACTACATCAAA
TAATACACTGAGGGGGATGT

Downstream 100 bases:

>100_bases
CGCCCTTTATGATTACAGTGCTTGCCGGTTTGTTCGTATGCACAACCTGTTACTACTACATAAAAGAAAAATCATGAGAA
AACGCTCCTTCTGAGAATTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMNKGGRLRKAVRKSIPATFRLFLAFNFFVYGLAKVVIGQFGEVTPEIEAAAGKGFTIAWTFFGYSHVYELFIGFGEILA
AVLLLIPRTAALGAVIFMPIIVNIVLINYCFDIGVQDLSTILMVMCLILLWMDRRKFMGIFRQEPIDSRQVMKR

Sequences:

>Translated_154_residues
MMNKGGRLRKAVRKSIPATFRLFLAFNFFVYGLAKVVIGQFGEVTPEIEAAAGKGFTIAWTFFGYSHVYELFIGFGEILA
AVLLLIPRTAALGAVIFMPIIVNIVLINYCFDIGVQDLSTILMVMCLILLWMDRRKFMGIFRQEPIDSRQVMKR
>Mature_154_residues
MMNKGGRLRKAVRKSIPATFRLFLAFNFFVYGLAKVVIGQFGEVTPEIEAAAGKGFTIAWTFFGYSHVYELFIGFGEILA
AVLLLIPRTAALGAVIFMPIIVNIVLINYCFDIGVQDLSTILMVMCLILLWMDRRKFMGIFRQEPIDSRQVMKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWOB_BACSU (P94572)

Other databases:

- EMBL:   Z82987
- EMBL:   AL009126
- PIR:   E70064
- RefSeq:   NP_391531.1
- ProteinModelPortal:   P94572
- EnsemblBacteria:   EBBACT00000003620
- GeneID:   936938
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36500
- NMPDR:   fig|224308.1.peg.3657
- GenoList:   BSU36500
- GeneTree:   EBGT00070000037047
- ProtClustDB:   CLSK2752534
- BioCyc:   BSUB:BSU36500-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17436; Mature: 17436

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12949740)-; HASH(0x12e478bc)-; HASH(0x12c8d0a0)-; HASH(0x129c681c)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKGGRLRKAVRKSIPATFRLFLAFNFFVYGLAKVVIGQFGEVTPEIEAAAGKGFTIAW
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEH
TFFGYSHVYELFIGFGEILAAVLLLIPRTAALGAVIFMPIIVNIVLINYCFDIGVQDLST
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ILMVMCLILLWMDRRKFMGIFRQEPIDSRQVMKR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCH
>Mature Secondary Structure
MMNKGGRLRKAVRKSIPATFRLFLAFNFFVYGLAKVVIGQFGEVTPEIEAAAGKGFTIAW
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEH
TFFGYSHVYELFIGFGEILAAVLLLIPRTAALGAVIFMPIIVNIVLINYCFDIGVQDLST
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ILMVMCLILLWMDRRKFMGIFRQEPIDSRQVMKR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377