Click here to switch to the map view.

The map label for this gene is accD

Identifier: 255767673

GI number: 255767673

Start: 2988693

End: 2989565

Strand: Reverse

Name: accD

Synonym: BSU29210

Alternate gene names: 255767673

Gene position: 2989565-2988693 (Counterclockwise)

Preceding gene: 16079974

Following gene: 16079972

Centisome position: 70.92

GC content: 43.87

Gene sequence:

>873_bases
TTGTTAAAGGATATATTCACGAAAAAGAAAAAGTATGCTTCCGTACCGTCTGATCAAGCGAAGCACGATGTTCCGGAAGG
CATTATGACAAAATGTCCTAAGTGTAAAAAAATCATGCTCACTAAAGAGTTGGATAAAAATATGCGGGTATGCATGAACT
GCGATTATCATTTCCCAATGAACGCAAAACAGCGTATCGAAAGCTTGATGGATGAACAATCCTTTGAGGAATTTAATCAG
GGAATGCTCTCGGAAAATCCGCTTGGTTTCCCGGGATATCTGGAAAAGCTTGAAAAAGATCGCGAGAAAACATCCTTAAA
CGAGGCTGTTGTGACAGGCAAGGGCACCATCGGCGGACACCCGGCTGTTGTCGCCGTCATGGACTCTTCATTCAGAATGG
GCAGCATGGGTTCAGTCGTCGGTGAAAAAATCACGCTTGCGATTGAAAAAGCAAAAGCTGATAAAGTTCCGTTTATTATT
TTTACGGCTTCAGGCGGTGCTAGAATGCAGGAAGGCGTATTAAGTTTGATGCAGATGGCAAAGACAAGCTCTGCGTTAAA
ACTGTTCAGTGAAGAACAGGGTCTTATTATTTCAGTAATGACGCATCCGACTACCGGGGGCGTATCAGCAAGCTTTGCAT
CCCTTGGCGATTACAATTTCGCTGAGCCTGGCGCGCTGATCGGTTTTGCCGGAAGACGGATTATTGAACAGACAATAGGA
GAAAAACTGCCTGAGGACTTCCAAACGGCTGAGTTTTTATTAAAACATGGACAGCTTGATGCGGTTATTCATCGCGACGA
TATGAAAAAAACGTTAGAAAATCTGCTGGATATGCATCAAACAGGAGGTGACATTGAGTGGCTCCAAGATTAG

Upstream 100 bases:

>100_bases
TTGACAAAAAAAGTACAATAGTTTCGGTAAAGTTATTAGCAAGTCTATCTGTTTGATGACATGCGGTGAAGAGAACCCTT
CACAAAAGGGAGGTAATCAT

Downstream 100 bases:

>100_bases
AATTTGAAAAACCGGTGATTGAACTGCAAACCAAAATCGCCGAACTAAAAAAATTCACCCAAGATTCCGATATGGATCTA
AGTGCGGAAATCGAACGGCT

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQ
GMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD

Sequences:

>Translated_290_residues
MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQ
GMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD
>Mature_290_residues
MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPMNAKQRIESLMDEQSFEEFNQ
GMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFII
FTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIG
EKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=259, Percent_Identity=47.8764478764479, Blast_Score=245, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32035; Mature: 32035

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPM
CCHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
NAKQRIESLMDEQSFEEFNQGMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFIIFTASGGARMQEGVLSLMQMA
CEEEEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
KTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIG
HHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD
HHCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLKDIFTKKKKYASVPSDQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRVCMNCDYHFPM
CCHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
NAKQRIESLMDEQSFEEFNQGMLSENPLGFPGYLEKLEKDREKTSLNEAVVTGKGTIGGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PAVVAVMDSSFRMGSMGSVVGEKITLAIEKAKADKVPFIIFTASGGARMQEGVLSLMQMA
CEEEEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
KTSSALKLFSEEQGLIISVMTHPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIG
HHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EKLPEDFQTAEFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD
HHCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA