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The map label for this gene is glcT

Identifier: 255767321

GI number: 255767321

Start: 1456092

End: 1456958

Strand: Direct

Name: glcT

Synonym: BSU13880

Alternate gene names: 255767321

Gene position: 1456092-1456958 (Clockwise)

Preceding gene: 16078451

Following gene: 16078453

Centisome position: 34.54

GC content: 37.6

Gene sequence:

>867_bases
ATGACAAAGGAGCTGAGGATCGTGAATGGGTCCTTCACAGTGAAAAAGGTACTGAATAATAACGTATTAATTGCTTCTCA
TCATAAATACAGCGAAGTCGTTTTAATCGGAAAAGGTATTGGTTTCGGAAAAAAACAAGATGATGTCATTGAAGATAAAG
GCTACGATAAAATGTTCATTTTAAAAGACGAGAAGGAACAAAAGCAGTTTAAAAAGCTCCTTGACTATGTTGATGAAAAG
CTCGTTGATATTTCAAACGATGTCATCTATCACATAAGCAATAGGACGAATCACTCATTAAATGAACATATTCACATTGC
GTTGACAGACCATATCGCATTTGCGATCAAAAGGCAGCAGCAGGGATTTGATATGAAAAATCCATTTCTAATGGAGACTC
AGTCACTATATCCTGAGGAGTACCAAATTGCCAAAGAAGTCATAGATATGATCAATGAAAAAGCGGGACTCTGCCTTCCG
GAAGGGGAGATTGGTTTTATCGCTCTGCATATCCATTCAGCGTTGACAAACCGTCCGCTGTCCGAGGTCAATCAGCACTC
TCAGCTCATGGCGCAGCTTGTCGAGGTGATTGAAGACTCATTTCAAATGAAAGTAAATAAGGAAAGTGTCAACTATTTGC
GGCTGATCAGGCATATCAGATTTACAATAGAAAGAATTAAAAAAGAAGAACCGACTAAAGAACCAGAAAAATTAATGTTG
TTATTGAAAAATGAATATCCGCTATGCTACAATACAGCTTGGAAATTGATTAAAATCTTGCAGCAAACATTGAAGAAACC
AGTTCATGAGGCGGAAGCGGTTTATCTGACGCTTCATCTGTACCGATTAACCAATAAAATTTCATAA

Upstream 100 bases:

>100_bases
TTCTGGATTACCGTCTCATCGAAAGATCGACTGTTTAGTGAATGCATTGAAAAAAGGTTTGACGTGCATTCTGTTCGTTA
TGTACGATATGAGGTATTGA

Downstream 100 bases:

>100_bases
ATTCAGTTTATCCTTATAACGTGTTACTGATTCGATCAGGCATGAGTGATTGAGGGAAAAAAACGGGAAGTTCATTCTCG
TTCTTTTGCGCACCCAATTT

Product: transcriptional antiterminator BglG family

Products: NA

Alternate protein names: RNA-binding antitermination protein GlcT [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKLLDYVDEK
LVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLP
EGEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML
LLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS

Sequences:

>Translated_288_residues
MTKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKLLDYVDEK
LVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLP
EGEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML
LLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS
>Mature_287_residues
TKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFILKDEKEQKQFKKLLDYVDEKL
VDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPE
GEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLL
LKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS

Specific function: Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of Glc

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=271, Percent_Identity=30.6273062730627, Blast_Score=154, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 33596; Mature: 33464

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00654 ANTITERMINATORS_BGLG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFI
CCCCEEEECCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCEEEE
LKDEKEQKQFKKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQ
EECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHH
QGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPL
CCCCCCCCEEECHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHHHCCCH
SEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML
HHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCC
>Mature Secondary Structure 
TKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVIEDKGYDKMFI
CCCEEEECCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCEEEE
LKDEKEQKQFKKLLDYVDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQ
EECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHH
QGFDMKNPFLMETQSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSALTNRPL
CCCCCCCCEEECHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHHHCCCH
SEVNQHSQLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLML
HHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLKNEYPLCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902727; 9384377 [H]