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The map label for this gene is yydF

Identifier: 16081070

GI number: 16081070

Start: 4127498

End: 4127647

Strand: Reverse

Name: yydF

Synonym: BSU40180

Alternate gene names: 16081070

Gene position: 4127647-4127498 (Counterclockwise)

Preceding gene: 16081072

Following gene: 16081069

Centisome position: 97.91

GC content: 30.0

Gene sequence:

>150_bases
ATGAAAAAGGAAATCACTAACAATGAGACTGTGAAAAACTTAGAATTTAAGGGTCTATTAGATGAATCACAAAAGTTAGC
AAAAGTGAATGATCTTTGGTATTTTGTAAAATCAAAAGAAAATCGCTGGATTCTTGGAAGTGGTCATTAA

Upstream 100 bases:

>100_bases
AAGAATAGTGACATTTTTCAGATTTTTTAGGTACAATATATTGACATGTATTGAATGATATAGAATAATTGGTTTATATT
AGAAAAGGAGGAGGGATAAT

Downstream 100 bases:

>100_bases
TTAGAGGGGTACAAAGGAGAGTCTAACTCTCCTTTACCATTTGTTGGGGGATATTTCATGTATAATAAAACAGTATCAAT
CAATTTAGATTCAAGGTGTA

Product: peptide controlling LiaRS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MKKEITNNETVKNLEFKGLLDESQKLAKVNDLWYFVKSKENRWILGSGH

Sequences:

>Translated_49_residues
MKKEITNNETVKNLEFKGLLDESQKLAKVNDLWYFVKSKENRWILGSGH
>Mature_49_residues
MKKEITNNETVKNLEFKGLLDESQKLAKVNDLWYFVKSKENRWILGSGH

Specific function: Suggested to be the precursor for an exported, modified peptide that has antimicrobial and/or signaling properties. Synthesis requires yydG and yydH; the peptide is proposed to be exported by the yydIJ transporter. In the absence of the transporter, the m

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYDF_BACSU (Q45596)

Other databases:

- EMBL:   D78193
- EMBL:   AL009126
- PIR:   D70091
- RefSeq:   NP_391898.1
- EnsemblBacteria:   EBBACT00000003056
- GeneID:   937753
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40180
- NMPDR:   fig|224308.1.peg.4024
- GenoList:   BSU40180
- ProtClustDB:   CLSK214839
- BioCyc:   BSUB:BSU40180-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5781; Mature: 5781

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEITNNETVKNLEFKGLLDESQKLAKVNDLWYFVKSKENRWILGSGH
CCCCCCCCCCCCCEEECCCCCCCHHHHHHCCEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MKKEITNNETVKNLEFKGLLDESQKLAKVNDLWYFVKSKENRWILGSGH
CCCCCCCCCCCCCEEECCCCCCCHHHHHHCCEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377