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The map label for this gene is yydG

Identifier: 16081069

GI number: 16081069

Start: 4126481

End: 4127440

Strand: Reverse

Name: yydG

Synonym: BSU40170

Alternate gene names: 16081069

Gene position: 4127440-4126481 (Counterclockwise)

Preceding gene: 16081070

Following gene: 255767867

Centisome position: 97.91

GC content: 30.42

Gene sequence:

>960_bases
ATGTATAATAAAACAGTATCAATCAATTTAGATTCAAGGTGTAATGCATCCTGTGACCATTGTTGTTTTTCTAGTTCACC
AACTTCAACAACCAGGATGGAAAAAGAATACATAAGAGAGTTAGTAACTGAATTTGCAAAAAACAAAACCATTCAAGTGA
TTTCTTTTACAGGTGGGGAAGTTTTTTTAGATTATAAATTTTTAAAAGAACTAATGGAAATCATTAAACCATATGAAAAA
CAAATAACGTTGATCTCTAATGGATTTTGGGGTTTGAGCAAGAAAAAGGTCCAGGAGTACTTTCATGATATGAATTCTTT
AAATGTGATAGCACTGACTATAAGTTATGATGAGTACCATGCTCCATTTGTCAAGTCTTCCAGTATTAAAAACATATTAG
AACATAGCAGGAAATACCCTGATATCGATATTTCTCTTAATATGGCAGTTACCAAAGACAAAATGTCCAACCACATTTTA
GAGGAATTGGGGGATTCAATCTTAGGTGTAAAGATAACAAAATTTCCAATGATATCAGTTGGCGCTGCTAAAACTAGAAT
TAAGCAAGAAAACATACATAAATTTTACAGTCTTGAAGATGAAGATTCCTTACATTGTCCCGGATATGACATTGTATATC
ATCATGATGGAGAAATTTATCCATGTTGTTCCCCTGCTATTTTTGAAACGAAAATAACCCTAAGGGAAGAATATAACCAA
AGTTTCGAAAGAACCGTGGAAAAGTTAAATTCCAATTTGCTATTATTTATTCTTAGAAAAGAAGGATTCAAATGGTTTTT
GAATATTTTAAAAGAAAATAACAAAATAGAGGAATTTGACATTCCTTATGAATTTTCCTCTATTTGTGGAGTTTGTGGTT
CCTTATTCAACTCTGCAGAAAAAATAAACTACTTCTATCCTTATATGGAAAAATACTATAATGAAAATTTTAAAGTATGA

Upstream 100 bases:

>100_bases
AAAATCAAAAGAAAATCGCTGGATTCTTGGAAGTGGTCATTAATTAGAGGGGTACAAAGGAGAGTCTAACTCTCCTTTAC
CATTTGTTGGGGGATATTTC

Downstream 100 bases:

>100_bases
AGATGAAAAATATGAAGTGCTTGTGCAAAACAACGTATTTATAAAAGACAAAAAAAGCGGAGAATACTATAAAAATAGTT
TAAATTCTCTGTCAGATAAA

Product: AdoMet radical enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEK
QITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHIL
EELGDSILGVKITKFPMISVGAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQ
SFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAEKINYFYPYMEKYYNENFKV

Sequences:

>Translated_319_residues
MYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEK
QITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHIL
EELGDSILGVKITKFPMISVGAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQ
SFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAEKINYFYPYMEKYYNENFKV
>Mature_319_residues
MYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEK
QITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHIL
EELGDSILGVKITKFPMISVGAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQ
SFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAEKINYFYPYMEKYYNENFKV

Specific function: Required for production of the modified peptide yydF (Probable). May activate a metalloenzyme (Potential)

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYDG_BACSU (Q45595)

Other databases:

- EMBL:   D78193
- EMBL:   AL009126
- PIR:   E70091
- RefSeq:   NP_391897.1
- ProteinModelPortal:   Q45595
- EnsemblBacteria:   EBBACT00000002334
- GeneID:   937720
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40170
- NMPDR:   fig|224308.1.peg.4023
- GenoList:   BSU40170
- OMA:   SSICDIC
- ProtClustDB:   CLSK806733
- BioCyc:   BSUB:BSU40170-MONOMER
- InterPro:   IPR007197

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 37212; Mature: 37212

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGE
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCE
VFLDYKFLKELMEIIKPYEKQITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYH
EEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCC
APFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHILEELGDSILGVKITKFPMISV
CCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHCCHHEEEEEECCCEEEC
GAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEHEEEHHHHHHHH
SFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAE
HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHH
KINYFYPYMEKYYNENFKV
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGE
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCE
VFLDYKFLKELMEIIKPYEKQITLISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYH
EEEEHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCC
APFVKSSSIKNILEHSRKYPDIDISLNMAVTKDKMSNHILEELGDSILGVKITKFPMISV
CCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHCCHHEEEEEECCCEEEC
GAAKTRIKQENIHKFYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEHEEEHHHHHHHH
SFERTVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGSLFNSAE
HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCHH
KINYFYPYMEKYYNENFKV
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377