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The map label for this gene is yydD

Identifier: 16081072

GI number: 16081072

Start: 4130578

End: 4132338

Strand: Reverse

Name: yydD

Synonym: BSU40200

Alternate gene names: 16081072

Gene position: 4132338-4130578 (Counterclockwise)

Preceding gene: 16081073

Following gene: 16081070

Centisome position: 98.02

GC content: 26.41

Gene sequence:

>1761_bases
GTGATTGTTATGATTATAAAAAATCTTTTTGTTTGCAATTCCCAAGAAATTTTGAAAGAGTATAAATTTAATGCTGTAGG
AGTAAATATAATACTTGGTGAAAAGAGAGAAGATCATGAAGAGACTAATGGTGTAGGTAAGTCAACGATGATTGAATGCA
TCTCCTTTTTACTAGGGAAGACTATATCAAATTTTTATACGACAAATGAAATTCTTCTCAATAAAAACGTTTTTATTGTT
TTGAATGTGGAAATTGATGGAAATCAAGTATTCCTTGCTAGATCTTTTAATTCTCCTAAACATGGTTATACATTACATGA
TACTTCTTTAACTTTTAATTTGGAGGAATGGAAAAAAGTTAGTATAAGTGTATATAAAAAATTTATTGAAAAGGAAATTT
TAAAGGGTGAGAAAGAGGATATAACTTTTGCGGCGTTAAGGGAGTATATTATAAGAGACGAAAAGACAGGGTTTAATGAT
ATAGTTTTACCGAATAGGGGAGGGTTAAAACAATATAAATTACTTAACTATCTTTTTACTTTACCAACTCATACAGAAAA
AAACATAAAGGTTTTTCGGGATAAGATTGAAAAATTAAATAGTGAAATAAAATTGATTGAATCAATGAATATTAACATTG
GCGATTTAAAAGTTAAGGAAGATGAATTAATAAATGAGATAGAGGATTACAATAGAGTTATCTATCAAACTAAGACTGCC
AATAAATATAATAATGATACAAATAGGTACTCAGAAATTAAAAGTGAACTTAATAAAATACAAAATGAAATATTTGAAAA
TGAACATATTTGTAAACAATATCAAAGAAATATAGATGATTTAAATAAAAAAGTAACTAAGATTAAAGAATTAGAAAATA
TAGAAAAATTCTATGAAGATATTGTAGGTTTTTTTCCAGAGGAAGTAAAACAGAATTATAATAAAGTCCAAGAGTTCTAT
AATTTCATGGTAGAAAGTAGAGGGAGTTATTTTAAAGATAAAATTGTTAAAATACAAGCCGATTTAAAAAAACTTAATAT
CAAAAAGCAAGGATTAACAGAACAACTGGAATCAAGTGCCAGAATTTTAAAGAGTAACAATTTCATTGAGGATATTTCCA
TTGTGATGGAAGAACAAAGAAGGAAAGAAATAGAGTTAGCGGAAGTAAGATTGAGAATTAGTGACTACGATAAAAAAAAC
CATATTTTTGATAAGATTAATGAACTTCAACATGAAATATTAAGAGTTAATTCAATGTATTATGATGAGTTTCAATCTTA
TAGCGCTATAGTTAGTGAGTTAAAGAAGCTTTTTAATAATCTAATGGATGTTACATACAACCAACATGGATTTTTAGATT
TTGAATATGATAATAGAATAAGTAACGCAAAACAATCAACTACAGGAAGGATCAAAATTTCTTGTTCTATACCGGATGAA
CGTTCACATGGTAGACTCCATATGAAGATAAATATATTTGATCTTACTTGGTTTTTATACAGGTGTATAAATAAGTGTAG
TTTGAATATTTTAATTCATGACGGATCTTATTCTAATCCTGATCCTCATGTAAAAGGTACATTATTAAAACATATCAATT
CAAGTCTGTTAGAGAATAGGATCGGACAATATTTTGTAACAATAAATAAAAATGAATTATTATTAGATGACCTTCAAGAA
TTAGAGTCGAAAGGTATGATTGTTGCAAAATTAGATAGAAACAATGAAGATAAAAATAGATTTTTTGGTTTTAGATTTTG
A

Upstream 100 bases:

>100_bases
ATTTGAATATTGAACGGATACTGTATTTATCGTTAACTTTTTTATATTCATTAGGTAAAGTTTCTTTTAATCAAAATATG
ATTAGCAGAACGGAGAGTTA

Downstream 100 bases:

>100_bases
CCAAATAATATTAAACTAGGGAGTTCTTATAGAACTTCCTTTTAACCTGTTTTAAAAATTCCCATAATGTCAAGGGTGTT
TAAATTCAGTATATAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MIVMIIKNLFVCNSQEILKEYKFNAVGVNIILGEKREDHEETNGVGKSTMIECISFLLGKTISNFYTTNEILLNKNVFIV
LNVEIDGNQVFLARSFNSPKHGYTLHDTSLTFNLEEWKKVSISVYKKFIEKEILKGEKEDITFAALREYIIRDEKTGFND
IVLPNRGGLKQYKLLNYLFTLPTHTEKNIKVFRDKIEKLNSEIKLIESMNINIGDLKVKEDELINEIEDYNRVIYQTKTA
NKYNNDTNRYSEIKSELNKIQNEIFENEHICKQYQRNIDDLNKKVTKIKELENIEKFYEDIVGFFPEEVKQNYNKVQEFY
NFMVESRGSYFKDKIVKIQADLKKLNIKKQGLTEQLESSARILKSNNFIEDISIVMEEQRRKEIELAEVRLRISDYDKKN
HIFDKINELQHEILRVNSMYYDEFQSYSAIVSELKKLFNNLMDVTYNQHGFLDFEYDNRISNAKQSTTGRIKISCSIPDE
RSHGRLHMKINIFDLTWFLYRCINKCSLNILIHDGSYSNPDPHVKGTLLKHINSSLLENRIGQYFVTINKNELLLDDLQE
LESKGMIVAKLDRNNEDKNRFFGFRF

Sequences:

>Translated_586_residues
MIVMIIKNLFVCNSQEILKEYKFNAVGVNIILGEKREDHEETNGVGKSTMIECISFLLGKTISNFYTTNEILLNKNVFIV
LNVEIDGNQVFLARSFNSPKHGYTLHDTSLTFNLEEWKKVSISVYKKFIEKEILKGEKEDITFAALREYIIRDEKTGFND
IVLPNRGGLKQYKLLNYLFTLPTHTEKNIKVFRDKIEKLNSEIKLIESMNINIGDLKVKEDELINEIEDYNRVIYQTKTA
NKYNNDTNRYSEIKSELNKIQNEIFENEHICKQYQRNIDDLNKKVTKIKELENIEKFYEDIVGFFPEEVKQNYNKVQEFY
NFMVESRGSYFKDKIVKIQADLKKLNIKKQGLTEQLESSARILKSNNFIEDISIVMEEQRRKEIELAEVRLRISDYDKKN
HIFDKINELQHEILRVNSMYYDEFQSYSAIVSELKKLFNNLMDVTYNQHGFLDFEYDNRISNAKQSTTGRIKISCSIPDE
RSHGRLHMKINIFDLTWFLYRCINKCSLNILIHDGSYSNPDPHVKGTLLKHINSSLLENRIGQYFVTINKNELLLDDLQE
LESKGMIVAKLDRNNEDKNRFFGFRF
>Mature_586_residues
MIVMIIKNLFVCNSQEILKEYKFNAVGVNIILGEKREDHEETNGVGKSTMIECISFLLGKTISNFYTTNEILLNKNVFIV
LNVEIDGNQVFLARSFNSPKHGYTLHDTSLTFNLEEWKKVSISVYKKFIEKEILKGEKEDITFAALREYIIRDEKTGFND
IVLPNRGGLKQYKLLNYLFTLPTHTEKNIKVFRDKIEKLNSEIKLIESMNINIGDLKVKEDELINEIEDYNRVIYQTKTA
NKYNNDTNRYSEIKSELNKIQNEIFENEHICKQYQRNIDDLNKKVTKIKELENIEKFYEDIVGFFPEEVKQNYNKVQEFY
NFMVESRGSYFKDKIVKIQADLKKLNIKKQGLTEQLESSARILKSNNFIEDISIVMEEQRRKEIELAEVRLRISDYDKKN
HIFDKINELQHEILRVNSMYYDEFQSYSAIVSELKKLFNNLMDVTYNQHGFLDFEYDNRISNAKQSTTGRIKISCSIPDE
RSHGRLHMKINIFDLTWFLYRCINKCSLNILIHDGSYSNPDPHVKGTLLKHINSSLLENRIGQYFVTINKNELLLDDLQE
LESKGMIVAKLDRNNEDKNRFFGFRF

Specific function: Unknown

COG id: COG5293

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYDD_BACSU (Q45598)

Other databases:

- EMBL:   D78193
- EMBL:   AL009126
- PIR:   C70091
- RefSeq:   NP_391900.1
- ProteinModelPortal:   Q45598
- SMR:   Q45598
- EnsemblBacteria:   EBBACT00000001141
- GeneID:   937732
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40200
- NMPDR:   fig|224308.1.peg.4026
- GenoList:   BSU40200
- GeneTree:   EBGT00050000005553
- HOGENOM:   HBG349041
- OMA:   DTHNLGK
- ProtClustDB:   CLSK219261
- BioCyc:   BSUB:BSU40200-MONOMER
- InterPro:   IPR018760

Pfam domain/function: PF10088 DUF2326

EC number: NA

Molecular weight: Translated: 69108; Mature: 69108

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMIIKNLFVCNSQEILKEYKFNAVGVNIILGEKREDHEETNGVGKSTMIECISFLLGK
CEEEEEEHHHHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHH
TISNFYTTNEILLNKNVFIVLNVEIDGNQVFLARSFNSPKHGYTLHDTSLTFNLEEWKKV
HHHHHCCCCEEEEECCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEEHHHHHHH
SISVYKKFIEKEILKGEKEDITFAALREYIIRDEKTGFNDIVLPNRGGLKQYKLLNYLFT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHH
LPTHTEKNIKVFRDKIEKLNSEIKLIESMNINIGDLKVKEDELINEIEDYNRVIYQTKTA
CCCCCCCHHHHHHHHHHHHHHHHEEHHHCCCCCCCEEECHHHHHHHHHHHHHEEEEEECC
NKYNNDTNRYSEIKSELNKIQNEIFENEHICKQYQRNIDDLNKKVTKIKELENIEKFYED
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
IVGFFPEEVKQNYNKVQEFYNFMVESRGSYFKDKIVKIQADLKKLNIKKQGLTEQLESSA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHH
RILKSNNFIEDISIVMEEQRRKEIELAEVRLRISDYDKKNHIFDKINELQHEILRVNSMY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YDEFQSYSAIVSELKKLFNNLMDVTYNQHGFLDFEYDNRISNAKQSTTGRIKISCSIPDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC
RSHGRLHMKINIFDLTWFLYRCINKCSLNILIHDGSYSNPDPHVKGTLLKHINSSLLENR
CCCCEEEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC
IGQYFVTINKNELLLDDLQELESKGMIVAKLDRNNEDKNRFFGFRF
CCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVMIIKNLFVCNSQEILKEYKFNAVGVNIILGEKREDHEETNGVGKSTMIECISFLLGK
CEEEEEEHHHHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHH
TISNFYTTNEILLNKNVFIVLNVEIDGNQVFLARSFNSPKHGYTLHDTSLTFNLEEWKKV
HHHHHCCCCEEEEECCEEEEEEEEECCCEEEEEECCCCCCCCEEEECCEEEEEHHHHHHH
SISVYKKFIEKEILKGEKEDITFAALREYIIRDEKTGFNDIVLPNRGGLKQYKLLNYLFT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHH
LPTHTEKNIKVFRDKIEKLNSEIKLIESMNINIGDLKVKEDELINEIEDYNRVIYQTKTA
CCCCCCCHHHHHHHHHHHHHHHHEEHHHCCCCCCCEEECHHHHHHHHHHHHHEEEEEECC
NKYNNDTNRYSEIKSELNKIQNEIFENEHICKQYQRNIDDLNKKVTKIKELENIEKFYED
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
IVGFFPEEVKQNYNKVQEFYNFMVESRGSYFKDKIVKIQADLKKLNIKKQGLTEQLESSA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHH
RILKSNNFIEDISIVMEEQRRKEIELAEVRLRISDYDKKNHIFDKINELQHEILRVNSMY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YDEFQSYSAIVSELKKLFNNLMDVTYNQHGFLDFEYDNRISNAKQSTTGRIKISCSIPDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC
RSHGRLHMKINIFDLTWFLYRCINKCSLNILIHDGSYSNPDPHVKGTLLKHINSSLLENR
CCCCEEEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC
IGQYFVTINKNELLLDDLQELESKGMIVAKLDRNNEDKNRFFGFRF
CCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377