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The map label for this gene is yxjN

Identifier: 16080940

GI number: 16080940

Start: 3992671

End: 3993144

Strand: Direct

Name: yxjN

Synonym: BSU38890

Alternate gene names: 16080940

Gene position: 3992671-3993144 (Clockwise)

Preceding gene: 16080939

Following gene: 16080941

Centisome position: 94.71

GC content: 46.2

Gene sequence:

>474_bases
ATGGCGATGAGCCCTTATATTTTTATTGTATTGATTCTTATTATTTTATCGATGTATCGAGAAAGAACGGTAAAGCCCGG
GAAGTTGCTGATCATTCCACTGTTGCTCTTATGGGGCGTATCTGCATCGTTTCAGCCGGCGTATTTTCATTCCGTATTAC
ATGTGGCGATCAGCGGCATTTTATTACTGATCGGGCTGGCCTGCGGGTTTGGCATTGGGAAGATGGTAAATGTACGGATT
CACCCGGAAACCGGAAAGGTCACTTCACGCGGCTCACTTGGGAGTGTTATCCTCATTCTAGTGATACTTTCTTTGCGCAT
GGCCGCGAGAACATGGCTGCCTGAGAGCAACGAGATGTTTATTGCCATTATTCATTCTATGTTCTTCGTTCCCCTCGGCA
CCATCACAGCCCGCAACATCATGCTTTACAAAGCATACAGACGACTGACCGCTGGCAAAGTATCCATTCAATAA

Upstream 100 bases:

>100_bases
TTATGCAGCGCGAACAAGTATAGAGCTGAAAAATCAATCTGCCGGTTGACGTTTTTCTTTCCTATTTTCGCTATGCTTAA
TGCAGAAAGGATTTGATGAC

Downstream 100 bases:

>100_bases
CCGAAAGAAGGACCAGCATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAGCCTTATTCTCATT
TTGAATTGCATACAATTTTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAMSPYIFIVLILIILSMYRERTVKPGKLLIIPLLLLWGVSASFQPAYFHSVLHVAISGILLLIGLACGFGIGKMVNVRI
HPETGKVTSRGSLGSVILILVILSLRMAARTWLPESNEMFIAIIHSMFFVPLGTITARNIMLYKAYRRLTAGKVSIQ

Sequences:

>Translated_157_residues
MAMSPYIFIVLILIILSMYRERTVKPGKLLIIPLLLLWGVSASFQPAYFHSVLHVAISGILLLIGLACGFGIGKMVNVRI
HPETGKVTSRGSLGSVILILVILSLRMAARTWLPESNEMFIAIIHSMFFVPLGTITARNIMLYKAYRRLTAGKVSIQ
>Mature_156_residues
AMSPYIFIVLILIILSMYRERTVKPGKLLIIPLLLLWGVSASFQPAYFHSVLHVAISGILLLIGLACGFGIGKMVNVRIH
PETGKVTSRGSLGSVILILVILSLRMAARTWLPESNEMFIAIIHSMFFVPLGTITARNIMLYKAYRRLTAGKVSIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXJN_BACSU (P55182)

Other databases:

- EMBL:   X99339
- EMBL:   D83026
- EMBL:   AL009126
- PIR:   C70080
- RefSeq:   NP_391768.1
- ProteinModelPortal:   P55182
- EnsemblBacteria:   EBBACT00000001411
- GeneID:   937424
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38890
- NMPDR:   fig|224308.1.peg.3894
- GenoList:   BSU38890
- GeneTree:   EBGT00050000005621
- OMA:   VISRRYY
- BioCyc:   BSUB:BSU38890-MONOMER
- InterPro:   IPR020223
- ProDom:   PD093362

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17383; Mature: 17251

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1315ccdc)-; HASH(0x1369215c)-; HASH(0x13875864)-; HASH(0x1312d768)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSPYIFIVLILIILSMYRERTVKPGKLLIIPLLLLWGVSASFQPAYFHSVLHVAISGI
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LLLIGLACGFGIGKMVNVRIHPETGKVTSRGSLGSVILILVILSLRMAARTWLPESNEMF
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
IAIIHSMFFVPLGTITARNIMLYKAYRRLTAGKVSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECH
>Mature Secondary Structure 
AMSPYIFIVLILIILSMYRERTVKPGKLLIIPLLLLWGVSASFQPAYFHSVLHVAISGI
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LLLIGLACGFGIGKMVNVRIHPETGKVTSRGSLGSVILILVILSLRMAARTWLPESNEMF
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
IAIIHSMFFVPLGTITARNIMLYKAYRRLTAGKVSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377