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The map label for this gene is yxjM

Identifier: 16080941

GI number: 16080941

Start: 3993162

End: 3994382

Strand: Direct

Name: yxjM

Synonym: BSU38900

Alternate gene names: 16080941

Gene position: 3993162-3994382 (Clockwise)

Preceding gene: 16080940

Following gene: 16080942

Centisome position: 94.72

GC content: 47.58

Gene sequence:

>1221_bases
ATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAGCCTTATTCTCATTTTGAATTGCATACAATT
TTTATCTCATCCAACTAAGGCTGATCCCATTTTGTTAGCATTTGTATTTGCGGTATACTTAGCATTCATTTGGATCATTC
CCTATGTGGCATCCACTGCTGTTAGTTTGAGCATATTCATCGGACTCTGGCTCCTGACCGATTTCTTTTGGGCTGTTTCC
GGCCAAGAGCAGGGTGCCGCCTATTTTTTGATTGTATTTTTAATGATATATGCCGCCTTTAGACTCCCTTCACGGCTATC
CTTGATCTTCACAGCATGTTTAATTGGAGGCAACATATTACTCCTATCCTCACAAGGGGGAAGCTTGAATACCATCATCA
GCAACATCTCGATCATGCTCGGTCTGTACGTCCTCTTCTCCTCCATGCGTTTCAGACGAGAAGCGAGAAGGGAGGCTGAA
CGGAATCATGCTGAATTGGCAAAAATGCATGTGCAGCTGGAGCATGCTCATAAAGAACTCCAGAAAGCGCATGCAGAGCT
GCAGGAGGCTTCTGTTCTTTCATTAAGGTACGCGGTCCTTGAGGAACGTACAAGAATTGCCCGCGACATTCATGACAGCA
TCGGTCACGAGCTGACTTCTGTGATTGTTCAGCTTCAATCCCTTCCCTATATCCTTAAAAGCAGCAAGGAGGATTCAGAA
AAAGTCATTCAAAATGTACTGAGTGTCGCCAGGGAGTGTCTTCAAGAAGTGCGGTCTGTTGTTCACCAAATGGGCCGTAG
TGAATCGATGGTGGGGCTTACCGCTTTGCGGGGGCTCATTCATCAAGTGGAGGAACGGAGCGGCTTGCACGTTTCTTTAG
ATACTGCCGGACTGTCAGAAGAGTCTTGGCCTCCAAACGTGAGCGAAACGATCTACCGCATCTTGCAGGAAGCGCTGACC
AATATCATTCGTCACGCTGACGCTTCTCATGCGGCGGCCGTCATTTCTAATGACAAGTCCCATCTCTATGTCACAATCAC
CGACGACGGACAATTCACCGGCAGCCTTACTTATGGATTTGGCCTGACAGGAATGAAAGAGCGCGCAGAAAAAGCAGGCG
GTTCCCTTACTTTCAGTGCCGTACAGCCGAGCGGCCTGAAAATTGAGCTGTCATTGCCGCTCATGACAACGAATAAGGAG
CAAAAAGATGAACAAAGATAA

Upstream 100 bases:

>100_bases
CCCTCGGCACCATCACAGCCCGCAACATCATGCTTTACAAAGCATACAGACGACTGACCGCTGGCAAAGTATCCATTCAA
TAACCGAAAGAAGGACCAGC

Downstream 100 bases:

>100_bases
AATACGCGTAGCGCTTGCCGATGATCAGCCGCTTGTGCGTGAAGGCTTCCGCTACGTCATCAACGCACAGACGGATATGA
CGGTTTCTGGCGAGGCCGGC

Product: two-component sensor histidine kinase YxjL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTAVSLSIFIGLWLLTDFFWAVS
GQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNILLLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAE
RNHAELAKMHVQLEHAHKELQKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSE
KVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSEESWPPNVSETIYRILQEALT
NIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKE
QKDEQR

Sequences:

>Translated_406_residues
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTAVSLSIFIGLWLLTDFFWAVS
GQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNILLLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAE
RNHAELAKMHVQLEHAHKELQKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSE
KVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSEESWPPNVSETIYRILQEALT
NIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKE
QKDEQR
>Mature_406_residues
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTAVSLSIFIGLWLLTDFFWAVS
GQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNILLLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAE
RNHAELAKMHVQLEHAHKELQKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSE
KVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSEESWPPNVSETIYRILQEALT
NIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKE
QKDEQR

Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain

Homologues:

Organism=Escherichia coli, GI87082311, Length=246, Percent_Identity=30.8943089430894, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788812, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXJM_BACSU (P55183)

Other databases:

- EMBL:   X99339
- EMBL:   D83026
- EMBL:   AL009126
- PIR:   B70080
- RefSeq:   NP_391769.1
- ProteinModelPortal:   P55183
- SMR:   P55183
- EnsemblBacteria:   EBBACT00000000493
- GeneID:   937441
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38900
- NMPDR:   fig|224308.1.peg.3895
- GenoList:   BSU38900
- GeneTree:   EBGT00070000031823
- OMA:   TCREVAQ
- BioCyc:   BSUB:BSU38900-MONOMER
- InterPro:   IPR003594
- InterPro:   IPR011712
- SMART:   SM00387

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; SSF55874 ATP_bd_ATPase

EC number: =2.7.13.3

Molecular weight: Translated: 45236; Mature: 45236

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x115996c4)-; HASH(0x1284d6b4)-; HASH(0x12c754ac)-; HASH(0x1349f93c)-; HASH(0x13540424)-; HASH(0x1351b318)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSLSIFIGLWLLTDFFWAVSGQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNIL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
LLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAERNHAELAKMHVQLEHAHKEL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
KVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
ESWPPNVSETIYRILQEALTNIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCEEEEEEECCCCEEEEEEECC
GLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKEQKDEQR
CCCCHHHHHHHCCCCEEEEEECCCCEEEEEECCEEECCCHHCCCCH
>Mature Secondary Structure
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSLSIFIGLWLLTDFFWAVSGQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNIL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
LLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAERNHAELAKMHVQLEHAHKEL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
KVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
ESWPPNVSETIYRILQEALTNIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCEEEEEEECCCCEEEEEEECC
GLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKEQKDEQR
CCCCHHHHHHHCCCCEEEEEECCCCEEEEEECCEEECCCHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377