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The map label for this gene is yxlH

Identifier: 16080915

GI number: 16080915

Start: 3966745

End: 3967947

Strand: Direct

Name: yxlH

Synonym: BSU38640

Alternate gene names: 16080915

Gene position: 3966745-3967947 (Clockwise)

Preceding gene: 16080914

Following gene: 16080922

Centisome position: 94.1

GC content: 48.79

Gene sequence:

>1203_bases
ATGGAATTACAGCAGGACTTGATTCCTCAGAAAAAAACAATCGGCGCTTTAGATCACGCCGTTTTTTTATGCATGGTATT
TTGTTTCTGGTTTTCAGGCTATATTTACGTTCCTGTATTCAGTCTGTATTTGGAGGATCTGCACTTTTCATATGGCGCAA
TCGGCATCATTCTCGGCAGCTACGGGGTCACGCAAATCCTTCTGCGATTCCCGCTCGGCCTTTTGTCAGACATCCTGTTT
TCCTTGCGCAAGCAATTGTTAATTGCCGGGTTCGGCTTTTCCGTCCTCAGCAGCCTGCTTTTTCTGATGTTTGATTCTTT
CTTCTTCGTGCTGGCCGCCCGGCTTTTCGCGGGAATCACTGCTTCTACGTGGGTGATGGCGACCATTTTATACGCACATT
ATTTCAACAATGGCAATGCATCAAAAGCAATGGGCATCATGCAGTTTTTTACCGTCATGCCTCAGTTTGCCAGCATTGTG
TTCTGCGGGCTCGCCGCAGCCCATTTAGGGAGGCAGGTTCCTTTTTGGATGGCGCTGGCAGCTTCTGCCGCAGGTCTGGT
GATCTGCTGCTTTATTCAGGATCCGTCTGCTCCTCCCGCAAACCGTGGCACCATTCGTGTCAATCAGTACATCAAAGATA
CATTGCGGCTGCCAAAGCTGAAGCTTTTCACCATCCTGTCTATGACGGCCCATGCCGTATTATTTATCACAGTGTTTGGT
TTTACGCCGCTTTACATGAATCAGCTCGGAATGGGCGACGCGGAGCTGCTTTGGGTGATGAGCGCCTTTTTCCTCCCACA
CGCAGCCGCCACATTAAGCTTTGTGTTTCTGCGCTTTACAAGCCGTATCGCTTACTCCGTGATGCTCATTAGTTTCGCTG
TCACCGGGGTCTGTTTGCTATATGTTCCTTTTTTAGCTGCATTGTTCACGGTTTGCATCACACACGCCTGTATTGGGCTG
GCGCTCGGCTTCGTTTTTCCTCTGCTGCTAAGCCATGTCGTCGAAATCAGTTCTGCCCGTTTAAAAATGTCAGTGATGGG
GTTTTACCAATCATTTTATGCGCTAGGCATCTTCCTCGGGCCCCTTCTTGCCGGAAAAATCGCACAGCTTATCGGGCTTG
CGGGAGTTTTTTATGGAGCCGGTTCTCTGGCATTTGCCGCCTTTTTTGTGATGCTCGCGCAAAAACGTAACATGATCAAT
TAA

Upstream 100 bases:

>100_bases
AGCGAACAGGGCTTTTTTAGAAGCCCTGTTTTTTTATTTTTCTATTGAAACGCTTTCAATAATTGTGTTGTACTTGGAAG
GAAAGGGGTGGAGAGATACG

Downstream 100 bases:

>100_bases
TAGCTTTCATACCGCCGGAAGCGCCACACAGAAAACACGGCCAGAAGCATGATGCACAGAATGGAGAAAGTGAGTGACCA
TCCGAAAAAATCTGCCCGCT

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MELQQDLIPQKKTIGALDHAVFLCMVFCFWFSGYIYVPVFSLYLEDLHFSYGAIGIILGSYGVTQILLRFPLGLLSDILF
SLRKQLLIAGFGFSVLSSLLFLMFDSFFFVLAARLFAGITASTWVMATILYAHYFNNGNASKAMGIMQFFTVMPQFASIV
FCGLAAAHLGRQVPFWMALAASAAGLVICCFIQDPSAPPANRGTIRVNQYIKDTLRLPKLKLFTILSMTAHAVLFITVFG
FTPLYMNQLGMGDAELLWVMSAFFLPHAAATLSFVFLRFTSRIAYSVMLISFAVTGVCLLYVPFLAALFTVCITHACIGL
ALGFVFPLLLSHVVEISSARLKMSVMGFYQSFYALGIFLGPLLAGKIAQLIGLAGVFYGAGSLAFAAFFVMLAQKRNMIN

Sequences:

>Translated_400_residues
MELQQDLIPQKKTIGALDHAVFLCMVFCFWFSGYIYVPVFSLYLEDLHFSYGAIGIILGSYGVTQILLRFPLGLLSDILF
SLRKQLLIAGFGFSVLSSLLFLMFDSFFFVLAARLFAGITASTWVMATILYAHYFNNGNASKAMGIMQFFTVMPQFASIV
FCGLAAAHLGRQVPFWMALAASAAGLVICCFIQDPSAPPANRGTIRVNQYIKDTLRLPKLKLFTILSMTAHAVLFITVFG
FTPLYMNQLGMGDAELLWVMSAFFLPHAAATLSFVFLRFTSRIAYSVMLISFAVTGVCLLYVPFLAALFTVCITHACIGL
ALGFVFPLLLSHVVEISSARLKMSVMGFYQSFYALGIFLGPLLAGKIAQLIGLAGVFYGAGSLAFAAFFVMLAQKRNMIN
>Mature_400_residues
MELQQDLIPQKKTIGALDHAVFLCMVFCFWFSGYIYVPVFSLYLEDLHFSYGAIGIILGSYGVTQILLRFPLGLLSDILF
SLRKQLLIAGFGFSVLSSLLFLMFDSFFFVLAARLFAGITASTWVMATILYAHYFNNGNASKAMGIMQFFTVMPQFASIV
FCGLAAAHLGRQVPFWMALAASAAGLVICCFIQDPSAPPANRGTIRVNQYIKDTLRLPKLKLFTILSMTAHAVLFITVFG
FTPLYMNQLGMGDAELLWVMSAFFLPHAAATLSFVFLRFTSRIAYSVMLISFAVTGVCLLYVPFLAALFTVCITHACIGL
ALGFVFPLLLSHVVEISSARLKMSVMGFYQSFYALGIFLGPLLAGKIAQLIGLAGVFYGAGSLAFAAFFVMLAQKRNMIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXLH_BACSU (P94376)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   C70082
- RefSeq:   NP_391743.1
- ProteinModelPortal:   P94376
- EnsemblBacteria:   EBBACT00000002408
- GeneID:   937392
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38640
- NMPDR:   fig|224308.1.peg.3869
- GenoList:   BSU38640
- GeneTree:   EBGT00050000000131
- HOGENOM:   HBG345756
- OMA:   SVMGFYQ
- ProtClustDB:   CLSK2752559
- BioCyc:   BSUB:BSU38640-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958
- PRINTS:   PR01035

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 43964; Mature: 43964

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc53dc90)-; HASH(0x133be1c8)-; HASH(0x12e21b04)-; HASH(0x131f9b0c)-; HASH(0x122670e8)-; HASH(0x133d3bbc)-; HASH(0x128aec30)-; HASH(0x13116160)-; HASH(0x130a17e4)-; HASH(0x1344e378)-; HASH(0x11feabd4)-; HASH(0x133b96d8)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQQDLIPQKKTIGALDHAVFLCMVFCFWFSGYIYVPVFSLYLEDLHFSYGAIGIILGS
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGVTQILLRFPLGLLSDILFSLRKQLLIAGFGFSVLSSLLFLMFDSFFFVLAARLFAGIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ASTWVMATILYAHYFNNGNASKAMGIMQFFTVMPQFASIVFCGLAAAHLGRQVPFWMALA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASAAGLVICCFIQDPSAPPANRGTIRVNQYIKDTLRLPKLKLFTILSMTAHAVLFITVFG
HCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FTPLYMNQLGMGDAELLWVMSAFFLPHAAATLSFVFLRFTSRIAYSVMLISFAVTGVCLL
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVPFLAALFTVCITHACIGLALGFVFPLLLSHVVEISSARLKMSVMGFYQSFYALGIFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLAGKIAQLIGLAGVFYGAGSLAFAAFFVMLAQKRNMIN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377