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The map label for this gene is yvoD

Identifier: 16080551

GI number: 16080551

Start: 3592457

End: 3593395

Strand: Reverse

Name: yvoD

Synonym: BSU34980

Alternate gene names: 16080551

Gene position: 3593395-3592457 (Counterclockwise)

Preceding gene: 16080552

Following gene: 16080550

Centisome position: 85.24

GC content: 49.2

Gene sequence:

>939_bases
ATGAAGAAGATCTTTCTGGCCGGTCTTGCAGCAGGTTTTCAAACAACATGGACGCTGGGTAAAGTGATTTTCCCGGTAAC
GCTATTGGTCACTTTGCTCCAGCATACCCCTGTCATGGATTGGCTTGTACGGCTGATCACACCGGTAATGGGTCTCTTCG
GGCTTTCTGGTGAAGCGGCCATTCCGCTTGTACTGGGAAATATGCTGAATCTGTATGCGGGAATTGCCGGGATTTTAACA
TTGGATTTATCTGTGAAAGAAGTCTTTATTTTAGCTGTTATGCTTTCTTTCTGTCATAACTTGATTATCGAATCGACAGT
TGCCGCAAAGGTTGGTATCAGAATTGGCGTCATATTGGCCGTGCGCATCGGTTTGGCCGCTGTGTCAGCCATCGTCATCA
ACCTCATTTGGCATGGCGGAAAGGAAACGGCGCAGTACGGTTTTATCGCTGCGAAGAGCGCGGCGCCAGACAGCTGGCTA
GGAATGTTGGCAGAAGCATTAACGAAAGCCGGACTTGGTGTTTTGCAGCTGGCGGCAATAGTGATCCCGCTGATGATTAT
CATCCAGTTTTTAAGAGATTTAGGCTGGCTTTATCGGTTTTCCAGGTGGCTGTCGCCGTTTACGCAGCTGCTTGGCATGA
ATAAAAATACGTCTATGACGATGGTGACGGGACTGACGATTGGTCTGGCCTACGGAGCGGGTGTCATGATCAAAGCTGTC
GAGGATGACGGCGTGAGCAAGCGGGACATGACATTGGCATTTATATTTCTCGTTGCCTGCCACGCGGTCGTGGAAGATAC
ACTTGTCTTTATTCCGCTTGGCATACCGGTCTGGCCGCTTCTTTTGATTCGTGTCACCACAGCAGTTCTGCTGACAATGG
CTATTGCGCACACGTGGAAAAAATGGAAACCCTCAGCGGTTGGAAAGGAAGCAATATGA

Upstream 100 bases:

>100_bases
TATTGATTGTTTTGGCTGTGGCAGCCATCATCTTCAGACGCGTCAAGGGATACTCGAAGGAGCGGTACGCGGAGTAGACG
TCAACAAAGGGGGATGAGGG

Downstream 100 bases:

>100_bases
GTGACAAACAAGTAACGACGATTCTGTTTGATTTAGACGGAACGCTTATTAATACGAATGAATTAATTATCGCGTCCTTT
TTGCATACACTGGAGCATTA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKIFLAGLAAGFQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVMGLFGLSGEAAIPLVLGNMLNLYAGIAGILT
LDLSVKEVFILAVMLSFCHNLIIESTVAAKVGIRIGVILAVRIGLAAVSAIVINLIWHGGKETAQYGFIAAKSAAPDSWL
GMLAEALTKAGLGVLQLAAIVIPLMIIIQFLRDLGWLYRFSRWLSPFTQLLGMNKNTSMTMVTGLTIGLAYGAGVMIKAV
EDDGVSKRDMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWKKWKPSAVGKEAI

Sequences:

>Translated_312_residues
MKKIFLAGLAAGFQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVMGLFGLSGEAAIPLVLGNMLNLYAGIAGILT
LDLSVKEVFILAVMLSFCHNLIIESTVAAKVGIRIGVILAVRIGLAAVSAIVINLIWHGGKETAQYGFIAAKSAAPDSWL
GMLAEALTKAGLGVLQLAAIVIPLMIIIQFLRDLGWLYRFSRWLSPFTQLLGMNKNTSMTMVTGLTIGLAYGAGVMIKAV
EDDGVSKRDMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWKKWKPSAVGKEAI
>Mature_312_residues
MKKIFLAGLAAGFQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVMGLFGLSGEAAIPLVLGNMLNLYAGIAGILT
LDLSVKEVFILAVMLSFCHNLIIESTVAAKVGIRIGVILAVRIGLAAVSAIVINLIWHGGKETAQYGFIAAKSAAPDSWL
GMLAEALTKAGLGVLQLAAIVIPLMIIIQFLRDLGWLYRFSRWLSPFTQLLGMNKNTSMTMVTGLTIGLAYGAGVMIKAV
EDDGVSKRDMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWKKWKPSAVGKEAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVOD_BACSU (O34382)

Other databases:

- EMBL:   U63310
- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   F70044
- RefSeq:   NP_391378.1
- ProteinModelPortal:   O34382
- EnsemblBacteria:   EBBACT00000001396
- GeneID:   936603
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34980
- NMPDR:   fig|224308.1.peg.3504
- GenoList:   BSU34980
- GeneTree:   EBGT00050000006179
- HOGENOM:   HBG313861
- OMA:   HSLIEDT
- ProtClustDB:   CLSK2517483
- BioCyc:   BSUB:BSU34980-MONOMER
- InterPro:   IPR011642

Pfam domain/function: PF07670 Gate

EC number: NA

Molecular weight: Translated: 33603; Mature: 33603

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x126e2184)-; HASH(0x12a0faa0)-; HASH(0x122ee680)-; HASH(0x129894f0)-; HASH(0x119c5034)-; HASH(0x1292cadc)-; HASH(0x12cf2330)-; HASH(0x40c01dbc)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLAGLAAGFQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVMGLFGLSGEAA
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH
IPLVLGNMLNLYAGIAGILTLDLSVKEVFILAVMLSFCHNLIIESTVAAKVGIRIGVILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRIGLAAVSAIVINLIWHGGKETAQYGFIAAKSAAPDSWLGMLAEALTKAGLGVLQLAAI
HHHHHHHHHHHHHHHHHCCCCHHHHHCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHH
VIPLMIIIQFLRDLGWLYRFSRWLSPFTQLLGMNKNTSMTMVTGLTIGLAYGAGVMIKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCEEEEEE
EDDGVSKRDMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWKPSAVGKEAI
HCCCCCCCCCCH
>Mature Secondary Structure
MKKIFLAGLAAGFQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVMGLFGLSGEAA
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH
IPLVLGNMLNLYAGIAGILTLDLSVKEVFILAVMLSFCHNLIIESTVAAKVGIRIGVILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRIGLAAVSAIVINLIWHGGKETAQYGFIAAKSAAPDSWLGMLAEALTKAGLGVLQLAAI
HHHHHHHHHHHHHHHHHCCCCHHHHHCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHH
VIPLMIIIQFLRDLGWLYRFSRWLSPFTQLLGMNKNTSMTMVTGLTIGLAYGAGVMIKAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCEEEEEE
EDDGVSKRDMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHTWK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWKPSAVGKEAI
HCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377