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The map label for this gene is yvaC

Identifier: 16080408

GI number: 16080408

Start: 3446237

End: 3448132

Strand: Reverse

Name: yvaC

Synonym: BSU33550

Alternate gene names: 16080408

Gene position: 3448132-3446237 (Counterclockwise)

Preceding gene: 16080409

Following gene: 16080407

Centisome position: 81.79

GC content: 49.84

Gene sequence:

>1896_bases
ATGAACAAAACTGCTGCGAACAATCAAAGAATCATGCCTATCGTGAAGGATGCCTTTCGCATTCATGCAAATCCATTTCC
TTGGAAAAAGGCTATCGGATCAGGTTTCGCTTCAGGGTTTCCTGTGCTGGTCGGTGCATTGGCAGGTCACACGGATTACG
GATTAATTGCAAGTATCGGAGGCTTTGTTTATTTATATGCGGGCGGTGAATCGTACAAAAAGCGCGCCTTGAAGCTGCTC
TTGGTTTCTATTGGGATCGCCCTCTCATTTGGTTTAGGGACGCTTTTGTCCGGGATGCTTTGGATGATGGCGGCTGTTTT
GGGGCTGATCGGTGCAGCGGCGATGTTTATTTTTAGCGCGCTCGGCATTCAAGGCCCTGCGCCGATGTTTTTTGTCCTTG
CCTTTTTAGTCAGTTCCGGGCTGCCGGCCGATCCTTCACAAGCGCTGTTCAGAGCGGGACTGACGTTTCTCGGCGGCATT
TTCGCCATGGGTATCGCTTTAATCGGCTGGTTATGGAACAAACATGGACCGGAGGGAGCGGTGCTGCAAAAAACATATCA
TCAGCTGGCTGCATGTCTTTCAGCCGTCGGAACGCCAGGTTTTCATAACGCACAGCATCAGACGGTGCTCATGCTTAGAA
CAGCCCGCCAAACGGTTCTTGGGAAAGGGAACAGACGGAAAAAATCGCGGCATGATGAACGATTTTTTCGCCTCCTTGAG
AAAGCTGACGACATATTTATTGCCATTATTCATTTTTCAGCTGAAACGCCGGACAGAGAGACCGCGCAGATTGAAAAGGC
ACTTCGCCAAACCGGAGATATGCTTGCGAATGCACGGGTTTTCAATACGTTTCAGATTAATGAAAATGAATCTGAGCCTA
GGCGGAAGCTGTTTGAAGAAATCAATGAGGTTTTGTATATCGCTTCAGGACGTTTTGATAAGCAGCTTGACGGGGAACCA
AGCCGCCTGCCATCCTCTTTTTACTTTTTGAGAAATGCCTTTGACTGGAAGTCTCCAGTTTTGATTAGAGCGTTAAAGTA
CGGAATTGTTCTGTTTGCCGCCGATATGTTTGCCCTCGCATTCGGCTTTGCACGCTCCTATTGGATTCCGCTTTCGGCAG
CAGCGGTCATGCTTGGCACTACTGTTGTTTTTACGCTTCACAGGGCTATTCAGCGTTCGGCCGGAACGGTGATCGGTGTT
ATACTGGCAGGCGCAATCCTGTTTTTTAAGCCGGGCGGTGTTTATATTGCGTTTTGTATTGCAGCGCTGCAATGTCTTCT
TGAGATGCTGATCGTCCGCAATTATGCGCTGGCTGTTCCCTTTTTAACCGCAAATGCGCTTGTTATCACAGAAAGTATGC
ATGGCGGGGCGGGCGCCGGTTATTTTATGATAGCGAGGCTGACTGATGTAGCTGTCGGCAGCGTGATCGGGCTGTTGGGA
ACAATGCTTTTGTGGCGGCGGTTTTCAACCAAGCGGCTGCCAGAACTTGTGCGGAATGTCATCCGGCTGGAAGGGCAGTT
TATGGAGAAACTGTTAACCGGGCAAATTGCCGACGAACACAAGTTAAGGGTGAGTCTTGTCAGGCTTCGGGATGCGTATG
ACAAGGCGCTTGGCGAGTTTCCTCACGCGAATGCGGATGCGCTCTGGCCTGCCATTTCCGGTGCTCAGCACTTAGGGTAC
TATTTGCTCTCGGCGCAAGCTCACCGCCGTCCGTCTGCTCCGTTTTCTGATGAAGAGATCAACCAGCTGCGGGCGTTTTT
TGAACAGGCTGAGCAATCCTTTATCATGAAAAGGATGCCTGCGGATATTCAAGTGCCGCATGTCCCTCATTATCCTCGGA
TCAGTAAAGAATTGTCCGCGCTGTATTCCGGCTTGAGAACAGCTTTTGAAAAGTAA

Upstream 100 bases:

>100_bases
TTATCGTGCGCACCAATTGAGAAGCTAACCGCGTTTTTGGGCATACTAAAGCGAAGAAACTGGAAAAGTTCTACACATTC
ATTGAAAAGGATTTTGTCAA

Downstream 100 bases:

>100_bases
GCTGTTTGGGAAAGTTAAATAATCTTTAATTCGAGATGTTTTACTTGAAAGTAAATTTCTTTGTCTCTATAATAAAGTCT
AAGAGAGACAGAATAATCAT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MNKTAANNQRIMPIVKDAFRIHANPFPWKKAIGSGFASGFPVLVGALAGHTDYGLIASIGGFVYLYAGGESYKKRALKLL
LVSIGIALSFGLGTLLSGMLWMMAAVLGLIGAAAMFIFSALGIQGPAPMFFVLAFLVSSGLPADPSQALFRAGLTFLGGI
FAMGIALIGWLWNKHGPEGAVLQKTYHQLAACLSAVGTPGFHNAQHQTVLMLRTARQTVLGKGNRRKKSRHDERFFRLLE
KADDIFIAIIHFSAETPDRETAQIEKALRQTGDMLANARVFNTFQINENESEPRRKLFEEINEVLYIASGRFDKQLDGEP
SRLPSSFYFLRNAFDWKSPVLIRALKYGIVLFAADMFALAFGFARSYWIPLSAAAVMLGTTVVFTLHRAIQRSAGTVIGV
ILAGAILFFKPGGVYIAFCIAALQCLLEMLIVRNYALAVPFLTANALVITESMHGGAGAGYFMIARLTDVAVGSVIGLLG
TMLLWRRFSTKRLPELVRNVIRLEGQFMEKLLTGQIADEHKLRVSLVRLRDAYDKALGEFPHANADALWPAISGAQHLGY
YLLSAQAHRRPSAPFSDEEINQLRAFFEQAEQSFIMKRMPADIQVPHVPHYPRISKELSALYSGLRTAFEK

Sequences:

>Translated_631_residues
MNKTAANNQRIMPIVKDAFRIHANPFPWKKAIGSGFASGFPVLVGALAGHTDYGLIASIGGFVYLYAGGESYKKRALKLL
LVSIGIALSFGLGTLLSGMLWMMAAVLGLIGAAAMFIFSALGIQGPAPMFFVLAFLVSSGLPADPSQALFRAGLTFLGGI
FAMGIALIGWLWNKHGPEGAVLQKTYHQLAACLSAVGTPGFHNAQHQTVLMLRTARQTVLGKGNRRKKSRHDERFFRLLE
KADDIFIAIIHFSAETPDRETAQIEKALRQTGDMLANARVFNTFQINENESEPRRKLFEEINEVLYIASGRFDKQLDGEP
SRLPSSFYFLRNAFDWKSPVLIRALKYGIVLFAADMFALAFGFARSYWIPLSAAAVMLGTTVVFTLHRAIQRSAGTVIGV
ILAGAILFFKPGGVYIAFCIAALQCLLEMLIVRNYALAVPFLTANALVITESMHGGAGAGYFMIARLTDVAVGSVIGLLG
TMLLWRRFSTKRLPELVRNVIRLEGQFMEKLLTGQIADEHKLRVSLVRLRDAYDKALGEFPHANADALWPAISGAQHLGY
YLLSAQAHRRPSAPFSDEEINQLRAFFEQAEQSFIMKRMPADIQVPHVPHYPRISKELSALYSGLRTAFEK
>Mature_631_residues
MNKTAANNQRIMPIVKDAFRIHANPFPWKKAIGSGFASGFPVLVGALAGHTDYGLIASIGGFVYLYAGGESYKKRALKLL
LVSIGIALSFGLGTLLSGMLWMMAAVLGLIGAAAMFIFSALGIQGPAPMFFVLAFLVSSGLPADPSQALFRAGLTFLGGI
FAMGIALIGWLWNKHGPEGAVLQKTYHQLAACLSAVGTPGFHNAQHQTVLMLRTARQTVLGKGNRRKKSRHDERFFRLLE
KADDIFIAIIHFSAETPDRETAQIEKALRQTGDMLANARVFNTFQINENESEPRRKLFEEINEVLYIASGRFDKQLDGEP
SRLPSSFYFLRNAFDWKSPVLIRALKYGIVLFAADMFALAFGFARSYWIPLSAAAVMLGTTVVFTLHRAIQRSAGTVIGV
ILAGAILFFKPGGVYIAFCIAALQCLLEMLIVRNYALAVPFLTANALVITESMHGGAGAGYFMIARLTDVAVGSVIGLLG
TMLLWRRFSTKRLPELVRNVIRLEGQFMEKLLTGQIADEHKLRVSLVRLRDAYDKALGEFPHANADALWPAISGAQHLGY
YLLSAQAHRRPSAPFSDEEINQLRAFFEQAEQSFIMKRMPADIQVPHVPHYPRISKELSALYSGLRTAFEK

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family

Homologues:

Organism=Escherichia coli, GI87082248, Length=516, Percent_Identity=22.6744186046512, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVAC_BACSU (O32225)

Other databases:

- EMBL:   AL009126
- PIR:   A70027
- RefSeq:   NP_391235.1
- EnsemblBacteria:   EBBACT00000000464
- GeneID:   936143
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33550
- NMPDR:   fig|224308.1.peg.3361
- GenoList:   BSU33550
- GeneTree:   EBGT00070000037390
- OMA:   VIMAVAI
- ProtClustDB:   CLSK514414
- BioCyc:   BSUB:BSU33550-MONOMER
- InterPro:   IPR006726

Pfam domain/function: PF04632 FUSC

EC number: NA

Molecular weight: Translated: 69424; Mature: 69424

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x123efbdc)-; HASH(0xfa131b8)-; HASH(0x1274b858)-; HASH(0x124d8e34)-; HASH(0x1274944c)-; HASH(0x124549b8)-; HASH(0xd20d690)-; HASH(0x1227612c)-; HASH(0x123c2b70)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure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CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377