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The map label for this gene is yvaD

Identifier: 16080409

GI number: 16080409

Start: 3448295

End: 3448696

Strand: Reverse

Name: yvaD

Synonym: BSU33560

Alternate gene names: 16080409

Gene position: 3448696-3448295 (Counterclockwise)

Preceding gene: 16080410

Following gene: 16080408

Centisome position: 81.81

GC content: 44.03

Gene sequence:

>402_bases
ATGAGATATATGAAGCTGTTTTTTCTCGTGACTGATATCGGTTTTATCTTGTACTGGCTGTCAGCCGGATTTTCGCTCAT
ACCGGAAAGCTGGGCTTTTAAACATCATGACCATCCGTTTATGATCGCTTGGAACTGGTCTTTTTTTCCGCTGGATATCC
TGATTTCTGTCACAGGGTTGTACAGCTTGTACCTACAGCGGGTGAATCGTGCTGACTGGAAGCTGATGGCGCTGATTTCT
CTTGTGCTGACCTGTTGTTCAGGTCTGCAGGCGCTATCATTCTGGACATTCAGCAGTGACTTTGATCTTGTGTGGTGGCT
GTTTAATGGGTATCTATTGATTTATCCTTTATTTTTTATTCACCTGCTCTTGAAGGAAGGCAGAAGGACAAAACAGTCCT
GA

Upstream 100 bases:

>100_bases
AAGTCATTTCAATTGGATTGATTATTGCCGGTGTTGTGTCTTTAAACCTGATCGAGCATGTTGCGGTGTCTGAGCCGGTA
CATAAAAGCGGGCAGTACAA

Downstream 100 bases:

>100_bases
CAGGTGCCGCTTTTATAATAAACTGATGTAATGAAGCAGAGACGGTATAAGTCTCTGTTTTTTTATCGTGCGCACCAATT
GAGAAGCTAACCGCGTTTTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRYMKLFFLVTDIGFILYWLSAGFSLIPESWAFKHHDHPFMIAWNWSFFPLDILISVTGLYSLYLQRVNRADWKLMALIS
LVLTCCSGLQALSFWTFSSDFDLVWWLFNGYLLIYPLFFIHLLLKEGRRTKQS

Sequences:

>Translated_133_residues
MRYMKLFFLVTDIGFILYWLSAGFSLIPESWAFKHHDHPFMIAWNWSFFPLDILISVTGLYSLYLQRVNRADWKLMALIS
LVLTCCSGLQALSFWTFSSDFDLVWWLFNGYLLIYPLFFIHLLLKEGRRTKQS
>Mature_133_residues
MRYMKLFFLVTDIGFILYWLSAGFSLIPESWAFKHHDHPFMIAWNWSFFPLDILISVTGLYSLYLQRVNRADWKLMALIS
LVLTCCSGLQALSFWTFSSDFDLVWWLFNGYLLIYPLFFIHLLLKEGRRTKQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVAD_BACSU (O32226)

Other databases:

- EMBL:   AL009126
- PIR:   B70027
- RefSeq:   NP_391236.1
- ProteinModelPortal:   O32226
- EnsemblBacteria:   EBBACT00000002252
- GeneID:   936144
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33560
- NMPDR:   fig|224308.1.peg.3362
- GenoList:   BSU33560
- GeneTree:   EBGT00050000001739
- HOGENOM:   HBG337469
- OMA:   WIPNLYL
- ProtClustDB:   CLSK887883
- BioCyc:   BSUB:BSU33560-MONOMER
- InterPro:   IPR020348
- ProDom:   PD082409

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15862; Mature: 15862

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1046a5f4)-; HASH(0x120263d8)-; HASH(0x119a4f00)-; HASH(0x12266f74)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYMKLFFLVTDIGFILYWLSAGFSLIPESWAFKHHDHPFMIAWNWSFFPLDILISVTGL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
YSLYLQRVNRADWKLMALISLVLTCCSGLQALSFWTFSSDFDLVWWLFNGYLLIYPLFFI
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHH
HLLLKEGRRTKQS
HHHHHHCCCCCCH
>Mature Secondary Structure
MRYMKLFFLVTDIGFILYWLSAGFSLIPESWAFKHHDHPFMIAWNWSFFPLDILISVTGL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
YSLYLQRVNRADWKLMALISLVLTCCSGLQALSFWTFSSDFDLVWWLFNGYLLIYPLFFI
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHH
HLLLKEGRRTKQS
HHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377