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The map label for this gene is yqbT

Identifier: 16079651

GI number: 16079651

Start: 2669324

End: 2670370

Strand: Reverse

Name: yqbT

Synonym: BSU25980

Alternate gene names: 16079651

Gene position: 2670370-2669324 (Counterclockwise)

Preceding gene: 16079652

Following gene: 255767598

Centisome position: 63.34

GC content: 44.13

Gene sequence:

>1047_bases
ATGTTTGAAGATCAAACCTATGAATCGATTATGGATCGAATGTTGAACAGCATTTCAGCGGACATTGATAAAAGGGAAGG
CAGCGTGATTTATAACGCGTTAGCTCCTGTAGCCGCAGAATTGGCCAAGTCTTATATTTGGCTCGATACTGTTCTGGAAC
TTGTCTTCTCAGACACGGCCCAAGGGGAATTTTTAGATCGACGAGCTACTGAAGCAGGCATTGAGCGGACTGCTGCCACA
AAAGCAGTCAGGGCAGGGGAGTTTACTGAAGGCGTGACCATTCCTGTAGGGTCTCGCTTTTATGTTGATAATCTTTATTT
TCAATACACAGCTGACGGGACGTTGGAGTGTGAAACAGCGGGGGAAGCAGGGAACGCAAACATATCCGGTCAGAATCTAT
TGTCATTAGACACTATACCTGGGCTTCAAAAAGCGATTGTGAAAGAGATTCTGATTCCTGGACGTGAAGAAGAGGATGAT
GACAGTTTAAGAGCTAGATATTTTACCCGCGTGCGTCGAGAAGCTGTCAGTGCCAATAAAGCACACTATAAACAATGGGC
TGAAGAAGTAGACGGAGTGGGGAAGGTAAAGGTCTTTCCGCTTTGGAACGGGGACGGTACAGTCAAAATTGTCGTGACCA
ATGCTAACTTGGAACCTGCTTCCGATATTTTAATATCAAAGGTGAAAAACTATATTGATCCTGAACCCGGACAAGGTGAG
GGACAAGCGCCAATAGGTGCCTTTGTCACAGTGGAGAGTGCGGTATGGAAAGAGGTTGAGATTTCAGCCGAGGTACTTCC
CGAGGTCAATAGCTCTATCGATCAGGTAAAGCAAGAAATTGAATCAGGTGTTTTAAATCTTTTTAAAAAGATTGCCTTTG
AAGATAACGTCATCCGTTTATCGCAGATTAATAATATCGTCTACAATTCACCTTCAGTAAGTGATTACGCAGATATTAAA
ATCAACGGCGTGGCCGAAAATTTGGTTCTGAGTGCCGTCGAAATCCCTAAATTGGGGCAGGTGAACATCATTGAGCAAAC
TCGATGA

Upstream 100 bases:

>100_bases
ACAGATTTTGAAATAGAAAAACAAGGCGAATCGTTCCGTGTCTCCTTTACAGTCGAGACTGACGAAGGAACATTGGAGAT
CGAGGAGGTGCTTGGCGAGG

Downstream 100 bases:

>100_bases
AATGACTGCTTACCTGCCGCCGTTCCTTACCAAGTTAAAGGAAATGGCTGAACTTCTTAAAGCGGAAGCTCCGGAATTTG
AGAAGCAAAATAACAGCATC

Product: phage capsid assembly protein; skin element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MFEDQTYESIMDRMLNSISADIDKREGSVIYNALAPVAAELAKSYIWLDTVLELVFSDTAQGEFLDRRATEAGIERTAAT
KAVRAGEFTEGVTIPVGSRFYVDNLYFQYTADGTLECETAGEAGNANISGQNLLSLDTIPGLQKAIVKEILIPGREEEDD
DSLRARYFTRVRREAVSANKAHYKQWAEEVDGVGKVKVFPLWNGDGTVKIVVTNANLEPASDILISKVKNYIDPEPGQGE
GQAPIGAFVTVESAVWKEVEISAEVLPEVNSSIDQVKQEIESGVLNLFKKIAFEDNVIRLSQINNIVYNSPSVSDYADIK
INGVAENLVLSAVEIPKLGQVNIIEQTR

Sequences:

>Translated_348_residues
MFEDQTYESIMDRMLNSISADIDKREGSVIYNALAPVAAELAKSYIWLDTVLELVFSDTAQGEFLDRRATEAGIERTAAT
KAVRAGEFTEGVTIPVGSRFYVDNLYFQYTADGTLECETAGEAGNANISGQNLLSLDTIPGLQKAIVKEILIPGREEEDD
DSLRARYFTRVRREAVSANKAHYKQWAEEVDGVGKVKVFPLWNGDGTVKIVVTNANLEPASDILISKVKNYIDPEPGQGE
GQAPIGAFVTVESAVWKEVEISAEVLPEVNSSIDQVKQEIESGVLNLFKKIAFEDNVIRLSQINNIVYNSPSVSDYADIK
INGVAENLVLSAVEIPKLGQVNIIEQTR
>Mature_348_residues
MFEDQTYESIMDRMLNSISADIDKREGSVIYNALAPVAAELAKSYIWLDTVLELVFSDTAQGEFLDRRATEAGIERTAAT
KAVRAGEFTEGVTIPVGSRFYVDNLYFQYTADGTLECETAGEAGNANISGQNLLSLDTIPGLQKAIVKEILIPGREEEDD
DSLRARYFTRVRREAVSANKAHYKQWAEEVDGVGKVKVFPLWNGDGTVKIVVTNANLEPASDILISKVKNYIDPEPGQGE
GQAPIGAFVTVESAVWKEVEISAEVLPEVNSSIDQVKQEIESGVLNLFKKIAFEDNVIRLSQINNIVYNSPSVSDYADIK
INGVAENLVLSAVEIPKLGQVNIIEQTR

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBT_BACSU (P45935)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   G69948
- RefSeq:   NP_390475.1
- EnsemblBacteria:   EBBACT00000001199
- GeneID:   937758
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25980
- NMPDR:   fig|224308.1.peg.2600
- GenoList:   BSU25980
- GeneTree:   EBGT00050000006414
- HOGENOM:   HBG421342
- OMA:   VFPLWNG
- ProtClustDB:   CLSK887136
- BioCyc:   BSUB:BSU25980-MONOMER
- InterPro:   IPR006949

Pfam domain/function: PF04865 Baseplate_J

EC number: NA

Molecular weight: Translated: 38241; Mature: 38241

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDQTYESIMDRMLNSISADIDKREGSVIYNALAPVAAELAKSYIWLDTVLELVFSDTA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGEFLDRRATEAGIERTAATKAVRAGEFTEGVTIPVGSRFYVDNLYFQYTADGTLECETA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECEEEEEECCCEEEEECC
GEAGNANISGQNLLSLDTIPGLQKAIVKEILIPGREEEDDDSLRARYFTRVRREAVSANK
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCH
AHYKQWAEEVDGVGKVKVFPLWNGDGTVKIVVTNANLEPASDILISKVKNYIDPEPGQGE
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
GQAPIGAFVTVESAVWKEVEISAEVLPEVNSSIDQVKQEIESGVLNLFKKIAFEDNVIRL
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEH
SQINNIVYNSPSVSDYADIKINGVAENLVLSAVEIPKLGQVNIIEQTR
HHHCHHEECCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCEEECCCCC
>Mature Secondary Structure
MFEDQTYESIMDRMLNSISADIDKREGSVIYNALAPVAAELAKSYIWLDTVLELVFSDTA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGEFLDRRATEAGIERTAATKAVRAGEFTEGVTIPVGSRFYVDNLYFQYTADGTLECETA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECEEEEEECCCEEEEECC
GEAGNANISGQNLLSLDTIPGLQKAIVKEILIPGREEEDDDSLRARYFTRVRREAVSANK
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCH
AHYKQWAEEVDGVGKVKVFPLWNGDGTVKIVVTNANLEPASDILISKVKNYIDPEPGQGE
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
GQAPIGAFVTVESAVWKEVEISAEVLPEVNSSIDQVKQEIESGVLNLFKKIAFEDNVIRL
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEH
SQINNIVYNSPSVSDYADIKINGVAENLVLSAVEIPKLGQVNIIEQTR
HHHCHHEECCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895