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The map label for this gene is yqbS

Identifier: 16079652

GI number: 16079652

Start: 2670363

End: 2670788

Strand: Reverse

Name: yqbS

Synonym: BSU25990

Alternate gene names: 16079652

Gene position: 2670788-2670363 (Counterclockwise)

Preceding gene: 16079653

Following gene: 16079651

Centisome position: 63.35

GC content: 42.49

Gene sequence:

>426_bases
ATGGCTTTGTCTCCGGAAATCGAGTTTGAGGATATAGAAGATGACAGCGAAGTCATAGAGACCTCGCAAACCTACAAAAT
AGATTTTGAAAATGGCCGTATCACAAATGAAATCATCACAGGCCTTGAAGCGATCAAGCAGTTTGTATATTTGTCTCTCC
ATACTGAGCGATACGCATATTCTGTTTACAGTCATGACATTGGAAATGAACTTCAAGACGTGCTGGCAGATAACGAAACA
ACAGACGCATATAAGAAAATGGAGATCCCTCGGCTGATAGAGGAAGCACTGATCTATGACGATCGGATTTCTGCTGTTAC
AGATTTTGAAATAGAAAAACAAGGCGAATCGTTCCGTGTCTCCTTTACAGTCGAGACTGACGAAGGAACATTGGAGATCG
AGGAGGTGCTTGGCGAGGATGTTTGA

Upstream 100 bases:

>100_bases
CGGTGAAGAAGCATTAAATACAGGTGAGCGTGTGATGATTGTCTCCTTAAAAGGCGGGCAATCATTTTTTATTCTCGACA
AAATATAGGAGGTGTTTGGA

Downstream 100 bases:

>100_bases
AGATCAAACCTATGAATCGATTATGGATCGAATGTTGAACAGCATTTCAGCGGACATTGATAAAAGGGAAGGCAGCGTGA
TTTATAACGCGTTAGCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MALSPEIEFEDIEDDSEVIETSQTYKIDFENGRITNEIITGLEAIKQFVYLSLHTERYAYSVYSHDIGNELQDVLADNET
TDAYKKMEIPRLIEEALIYDDRISAVTDFEIEKQGESFRVSFTVETDEGTLEIEEVLGEDV

Sequences:

>Translated_141_residues
MALSPEIEFEDIEDDSEVIETSQTYKIDFENGRITNEIITGLEAIKQFVYLSLHTERYAYSVYSHDIGNELQDVLADNET
TDAYKKMEIPRLIEEALIYDDRISAVTDFEIEKQGESFRVSFTVETDEGTLEIEEVLGEDV
>Mature_140_residues
ALSPEIEFEDIEDDSEVIETSQTYKIDFENGRITNEIITGLEAIKQFVYLSLHTERYAYSVYSHDIGNELQDVLADNETT
DAYKKMEIPRLIEEALIYDDRISAVTDFEIEKQGESFRVSFTVETDEGTLEIEEVLGEDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdS

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBS_BACSU (P45934)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69948
- RefSeq:   NP_390476.1
- ProteinModelPortal:   P45934
- EnsemblBacteria:   EBBACT00000002237
- GeneID:   937757
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25990
- NMPDR:   fig|224308.1.peg.2601
- GenoList:   BSU25990
- GeneTree:   EBGT00050000006459
- HOGENOM:   HBG419097
- OMA:   HTERYAY
- ProtClustDB:   CLSK887135
- BioCyc:   BSUB:BSU25990-MONOMER
- InterPro:   IPR020288
- ProDom:   PD033094

Pfam domain/function: PF10934 DUF2634

EC number: NA

Molecular weight: Translated: 16217; Mature: 16086

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSPEIEFEDIEDDSEVIETSQTYKIDFENGRITNEIITGLEAIKQFVYLSLHTERYAY
CCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHEEECCHHEE
SVYSHDIGNELQDVLADNETTDAYKKMEIPRLIEEALIYDDRISAVTDFEIEKQGESFRV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCEEEE
SFTVETDEGTLEIEEVLGEDV
EEEEECCCCCEEHHHHCCCCC
>Mature Secondary Structure 
ALSPEIEFEDIEDDSEVIETSQTYKIDFENGRITNEIITGLEAIKQFVYLSLHTERYAY
CCCCCCCCCCCCCHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHEEECCHHEE
SVYSHDIGNELQDVLADNETTDAYKKMEIPRLIEEALIYDDRISAVTDFEIEKQGESFRV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCEEEE
SFTVETDEGTLEIEEVLGEDV
EEEEECCCCCEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895