Click here to switch to the map view.

The map label for this gene is yqcA

Identifier: 255767598

GI number: 255767598

Start: 2668762

End: 2669340

Strand: Reverse

Name: yqcA

Synonym: BSU25970

Alternate gene names: 255767598

Gene position: 2669340-2668762 (Counterclockwise)

Preceding gene: 16079651

Following gene: 16079649

Centisome position: 63.32

GC content: 44.56

Gene sequence:

>579_bases
TTGAGCAAACTCGATGAAATGACTGCTTACCTGCCGCCGTTCCTTACCAAGTTAAAGGAAATGGCTGAACTTCTTAAAGC
GGAAGCTCCGGAATTTGAGAAGCAAAATAACAGCATCTTTGATCTGACAGATCAGCTGTTTGTTACTACGGCAACCTGGG
GGCTTGAACGATGGGAAAAGATTTTGAACGTACCGCGGGAATCAGGTGACACCGATGAGATCCGCCGATTGCGCCTAATC
TCTAAAATGTCCAATATACCGCCGGCAACATATAGGGCCATTGAACACGCGTTGAACCGGTTCCTGAAAAATCCGTCAGC
TCAGGTTCGGCTGCTTCCCGGAGAGTACCGTTTTAAGGTTGATATTGATATAGATGATATGCAGCATATGAGCGAGCTCA
TAGAAACATTGGAGAATATGAAGCCAGCTCATTTGGCATATACCTTGCGAGCTGCTTTGAATGAGCCACTCCAAATAAAA
GATACTGTCATTTTGAATAACAGAAGGTATCGAAAAGCAAGTGAGCTAAAGGTAGGTTATTCCGTCACGCTCAATAATAA
CGAGGTGGTCCTTGTATGA

Upstream 100 bases:

>100_bases
CCTTCAGTAAGTGATTACGCAGATATTAAAATCAACGGCGTGGCCGAAAATTTGGTTCTGAGTGCCGTCGAAATCCCTAA
ATTGGGGCAGGTGAACATCA

Downstream 100 bases:

>100_bases
TTACACAGCTTTATAGAGAGCGTACAGCTGCAGATTTGAAAAATAGAATATCGAAAGTGCTGCTGAATGGAAATGAAACA
GAAATTGTGGAACTCACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEKILNVPRESGDTDEIRRLRLI
SKMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKVDIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIK
DTVILNNRRYRKASELKVGYSVTLNNNEVVLV

Sequences:

>Translated_192_residues
MSKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEKILNVPRESGDTDEIRRLRLI
SKMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKVDIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIK
DTVILNNRRYRKASELKVGYSVTLNNNEVVLV
>Mature_191_residues
SKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEKILNVPRESGDTDEIRRLRLIS
KMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKVDIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIKD
TVILNNRRYRKASELKVGYSVTLNNNEVVLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdU

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCA_BACSU (P45936)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   H69948
- RefSeq:   NP_390474.2
- EnsemblBacteria:   EBBACT00000002641
- GeneID:   937763
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25970
- NMPDR:   fig|224308.1.peg.2599
- GenoList:   BSU25970
- GeneTree:   EBGT00050000006428
- HOGENOM:   HBG348928
- ProtClustDB:   CLSK626492
- BioCyc:   BSUB:BSU25970-MONOMER
- InterPro:   IPR018755

Pfam domain/function: PF10076 DUF2313

EC number: NA

Molecular weight: Translated: 22248; Mature: 22117

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
ILNVPRESGDTDEIRRLRLISKMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKV
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEE
DIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIKDTVILNNRRYRKASELKVGY
EECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHEEEEE
SVTLNNNEVVLV
EEEECCCEEEEC
>Mature Secondary Structure 
SKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
ILNVPRESGDTDEIRRLRLISKMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKV
HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEE
DIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIKDTVILNNRRYRKASELKVGY
EECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHEEEEE
SVTLNNNEVVLV
EEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895