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The map label for this gene is yqcB

Identifier: 16079649

GI number: 16079649

Start: 2668493

End: 2668765

Strand: Reverse

Name: yqcB

Synonym: BSU25960

Alternate gene names: 16079649

Gene position: 2668765-2668493 (Counterclockwise)

Preceding gene: 255767598

Following gene: 255767597

Centisome position: 63.31

GC content: 37.0

Gene sequence:

>273_bases
ATGATTACACAGCTTTATAGAGAGCGTACAGCTGCAGATTTGAAAAATAGAATATCGAAAGTGCTGCTGAATGGAAATGA
AACAGAAATTGTGGAACTCACCATTCAGGGTGCCGTTGTCACGGTGCTTACTCAACGAGAGGAAGACATCAAACATATTA
AGAGTGTTCAGATACTTGATGATCAAAACAACGTGATTACGGAAAGAACAACAGATTTAGACGTTAGTAATAATAGAACG
CTAGATTTTAGGATTACTTTTGAGGTGGTTTAA

Upstream 100 bases:

>100_bases
TAAAAGATACTGTCATTTTGAATAACAGAAGGTATCGAAAAGCAAGTGAGCTAAAGGTAGGTTATTCCGTCACGCTCAAT
AATAACGAGGTGGTCCTTGT

Downstream 100 bases:

>100_bases
CAATGGCTTATGATGCAAAAACAGATTGGCTCCCGGACGATCCGATTAATGAAGATGATGTGAACCGTTGGGAGAAAGGC
ATTCAAGATGCGCATAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MITQLYRERTAADLKNRISKVLLNGNETEIVELTIQGAVVTVLTQREEDIKHIKSVQILDDQNNVITERTTDLDVSNNRT
LDFRITFEVV

Sequences:

>Translated_90_residues
MITQLYRERTAADLKNRISKVLLNGNETEIVELTIQGAVVTVLTQREEDIKHIKSVQILDDQNNVITERTTDLDVSNNRT
LDFRITFEVV
>Mature_90_residues
MITQLYRERTAADLKNRISKVLLNGNETEIVELTIQGAVVTVLTQREEDIKHIKSVQILDDQNNVITERTTDLDVSNNRT
LDFRITFEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCB_BACSU (P45937)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69949
- RefSeq:   NP_390473.1
- ProteinModelPortal:   P45937
- EnsemblBacteria:   EBBACT00000002510
- GeneID:   937762
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25960
- NMPDR:   fig|224308.1.peg.2598
- GenoList:   BSU25960
- GeneTree:   EBGT00050000006673
- HOGENOM:   HBG112184
- OMA:   NVITERT
- ProtClustDB:   CLSK214836
- BioCyc:   BSUB:BSU25960-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10357; Mature: 10357

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQLYRERTAADLKNRISKVLLNGNETEIVELTIQGAVVTVLTQREEDIKHIKSVQILD
CCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCEEEEEEECCHHHHHHHHEEEEEE
DQNNVITERTTDLDVSNNRTLDFRITFEVV
CCCCEEEEECCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MITQLYRERTAADLKNRISKVLLNGNETEIVELTIQGAVVTVLTQREEDIKHIKSVQILD
CCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCEEEEEEECCHHHHHHHHEEEEEE
DQNNVITERTTDLDVSNNRTLDFRITFEVV
CCCCEEEEECCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895