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The map label for this gene is ypiB

Identifier: 16079315

GI number: 16079315

Start: 2365736

End: 2366275

Strand: Reverse

Name: ypiB

Synonym: BSU22580

Alternate gene names: NA

Gene position: 2366275-2365736 (Counterclockwise)

Preceding gene: 16079316

Following gene: 16079314

Centisome position: 56.13

GC content: 39.44

Gene sequence:

>540_bases
ATGCAGACCCCTGTTTCTGTCAATGAGAAAAAAGATTTTATCCGTTGGTTTTTAAACCATTATCAGTTAAAGCGCCGAGA
GTGCGTTTGGATCTTGAACTACTTAATGAGCCATGATTCTCTCATGGAGAAGGTTCATTTTGTGGAGCAGGCTGAATTTT
GCCCGAGAGGCATTATAATGTCAACACATTGTGTTGAAGAAGTTCCGTTCCGGTTCTATAAAGAGAATGTCATGACTACC
GACGCGGAAAAATCTTTTCATGATATTAGATTAAATAAACAGCAGGATTTGTTTATCCAGCTTAATTTCCGTTCGGCTTA
CAGCTCACCTGAATATGCGGCGGTGCTGGAGTCCAACCCGCATATTCCGAAAAACCTTTTTGAGAATAAAAAAGATCAGG
GATTGGCGGAACAGATTTTAGAGCACGCTATTTCCACATTCCAAAGAGAAAAATTATTAAAAGACATTGACGACGCGTTA
GATCGTCATGATAAAGAGGCATTTGAACAATTATCGCGCCAATTAAATCAGCTCACATAA

Upstream 100 bases:

>100_bases
TGCGAATCGAGGATGAATTTTCTAGATAAGCAGGAATATTAACCATTCATGTGGAACATATAAGTATATAGATTATACGA
ACGATAGAGGAGGGAATTAC

Downstream 100 bases:

>100_bases
TATGACCAGCCTTGCAGTGAATTGCAAGGCTTGTTGCCGTAAAGGGGGAGAACGATGAGGTGGAGAATCACTGATGCCAA
GGACTATTTACAAGCTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHIPKNLFENKKDQGLAEQILEHAISTFQREKLLKDIDDAL
DRHDKEAFEQLSRQLNQLT

Sequences:

>Translated_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHIPKNLFENKKDQGLAEQILEHAISTFQREKLLKDIDDAL
DRHDKEAFEQLSRQLNQLT
>Mature_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHIPKNLFENKKDQGLAEQILEHAISTFQREKLLKDIDDAL
DRHDKEAFEQLSRQLNQLT

Specific function: Unknown

COG id: COG5582

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0302 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011188
- InterPro:   IPR014957
- InterPro:   IPR014963 [H]

Pfam domain/function: PF08858 IDEAL; PF08864 UPF0302 [H]

EC number: NA

Molecular weight: Translated: 21365; Mature: 21365

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
STHCVEEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCEEEECCCC
HIPKNLFENKKDQGLAEQILEHAISTFQREKLLKDIDDALDRHDKEAFEQLSRQLNQLT
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
STHCVEEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCEEEECCCC
HIPKNLFENKKDQGLAEQILEHAISTFQREKLLKDIDDALDRHDKEAFEQLSRQLNQLT
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA