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The map label for this gene is ypiF

Identifier: 16079314

GI number: 16079314

Start: 2365235

End: 2365681

Strand: Reverse

Name: ypiF

Synonym: BSU22570

Alternate gene names: 16079314

Gene position: 2365681-2365235 (Counterclockwise)

Preceding gene: 16079315

Following gene: 16079313

Centisome position: 56.12

GC content: 38.93

Gene sequence:

>447_bases
ATGAGGTGGAGAATCACTGATGCCAAGGACTATTTACAAGCTAAGGATTACATTGATACCGCTGTCATACCATTAATTAA
CATAAGGGTTAATAACCATTTTAAAATGGCGGCGGAGAAAGGCGAGTTTACGCAGCTTCTCTCAGAAGAACTTGAAAGGC
AGTTAAAGGGACGGGTATATTTACTTCCGCCTTATACATATGTTGATAGAAATGAAATAACCGTTCAAGGGCTTAAGGAT
TTGCGGGAAGAGCTGATAACGGAATTTCCGCATGTTGTCCTGCTCACATCTGACGAAAGTTGGAGAGCTGAGGATGCGTT
AGGCAAAATGATTGTTACATCGTCTGTTCCATTAGAGCATTTAAATGACTCTTTAAAAAGAAAAATATTGGATGAACGCA
CTGCTGAAATTTTGAACGTTTTGTTACAGTTATGGAGCACTTTATAA

Upstream 100 bases:

>100_bases
AGAGGCATTTGAACAATTATCGCGCCAATTAAATCAGCTCACATAATATGACCAGCCTTGCAGTGAATTGCAAGGCTTGT
TGCCGTAAAGGGGGAGAACG

Downstream 100 bases:

>100_bases
AAACACTTACATTTCCTTATAAACAATATTTTGGCTATATTGACCTTGCTGAGAGATTCATATATTATGAGGGTGTCTAG
AGTTATTGCAATATTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEELERQLKGRVYLLPPYTYVDRNEITVQGLKD
LREELITEFPHVVLLTSDESWRAEDALGKMIVTSSVPLEHLNDSLKRKILDERTAEILNVLLQLWSTL

Sequences:

>Translated_148_residues
MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEELERQLKGRVYLLPPYTYVDRNEITVQGLKD
LREELITEFPHVVLLTSDESWRAEDALGKMIVTSSVPLEHLNDSLKRKILDERTAEILNVLLQLWSTL
>Mature_148_residues
MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEELERQLKGRVYLLPPYTYVDRNEITVQGLKD
LREELITEFPHVVLLTSDESWRAEDALGKMIVTSSVPLEHLNDSLKRKILDERTAEILNVLLQLWSTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPIF_BACSU (P54391)

Other databases:

- EMBL:   L47709
- EMBL:   AL009126
- EMBL:   U25535
- PIR:   G69936
- RefSeq:   NP_390138.1
- EnsemblBacteria:   EBBACT00000001360
- GeneID:   939015
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22570
- NMPDR:   fig|224308.1.peg.2261
- GenoList:   BSU22570
- GeneTree:   EBGT00050000002024
- HOGENOM:   HBG313419
- OMA:   KDYIDTA
- ProtClustDB:   CLSK2460930
- BioCyc:   BSUB:BSU22570-MONOMER
- InterPro:   IPR019615

Pfam domain/function: PF10673 DUF2487

EC number: NA

Molecular weight: Translated: 17267; Mature: 17267

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEELERQLKGRVY
CCEECCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHCCCEE
LLPPYTYVDRNEITVQGLKDLREELITEFPHVVLLTSDESWRAEDALGKMIVTSSVPLEH
EECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHH
LNDSLKRKILDERTAEILNVLLQLWSTL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEELERQLKGRVY
CCEECCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHCCCEE
LLPPYTYVDRNEITVQGLKDLREELITEFPHVVLLTSDESWRAEDALGKMIVTSSVPLEH
EECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHH
LNDSLKRKILDERTAEILNVLLQLWSTL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 7592464