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The map label for this gene is ypiA

Identifier: 16079316

GI number: 16079316

Start: 2366347

End: 2367618

Strand: Reverse

Name: ypiA

Synonym: BSU22590

Alternate gene names: 16079316

Gene position: 2367618-2366347 (Counterclockwise)

Preceding gene: 16079317

Following gene: 16079315

Centisome position: 56.16

GC content: 41.82

Gene sequence:

>1272_bases
TTGAATACATTGATTCAAGAAGCCATAAAATTAGTTGAAGCAGGTGAAACAGAAAAAGGCCTCAACACGCTCTCGAAGGC
TGAAAAACAGCTGCATGATGAAGATAAAGCCATTGCAGCCCAGCTTTATTACGAGTGGGGCGATGTAGAAAAAGCCATTT
CACTGATTAGTGATCTACATGATTTATATCCAAATGAAACAGAACTGACGAATTTCTACGCTGAACTTTTAATAGATATT
GACGAAGAAGAAAAAGCCCTCGCTGTGCTGGAGACTATTCCGGAAACAGATCCATCATATCCGGAAAGTTTGCTGCTTAT
GGCGGATCTTTATCAGATGCAGGGGTTATTCGAAGTCAGTGAACAAAAGCTTTTCCAGGCAAAGTCCATTCTGGACAATG
AACCTGTTATTGATTTTGCACTGGGAGAACTTTACTTTGCTCAGGGAGCCTATGCAAAAGCGGTTCAATATTTTAAAACA
ACGGCTGAGGAGCAGAGTGAGATCGGGGGCGTTAATGTCCATCAAAGACTGGCAGAATCGTTAAGTGCCTCAGGTGAATT
TGAGGATGCCATTCCATGGTATGAGAAAGCTGTCGATGAGAATCCTGATCCTAATACGATTTTCGGCTATGGTTTTACAG
CCTTACAGGCGGGGCTTGTGAAAACAGCTATTAAGCAGCTGTCTGATTTAAAGGAGCTTGATCCATCTTATACTTCACTT
TATATGCCGCTCTCGAAAAGCTATGAAGCTGAAGGAATGTATGAAGAGGCATTAAAAACGGCAAAAGAGGGGATCAGATA
TGATGAATATAACAAAGAACTTTTCCTTTATGCCGCCAAAATGGCCTTGAAAATCGGGAAGTCAGAAGAGGGGAAGAAGC
TGCTTCAGGAGGCGCTTGCGCTTGATCCGGGCTTTGTCGAGGCGCTTCATACACTTCTTGCCGTGTATCACAAAGAAGAG
GATTATGATCAGATCATTGATCTTATTCAAGAGGTTCGAAGCTACGGTGAAGAAGATCCTAAATACAATTGGTATCTTGC
AAGCGCATATACTGAATTAGAGCAATACGAGGAAGCAAAACAATCCTTTGAGGCTGCCTATCTTCATTACCGGGAGGATA
GAGATTTCTTATATGAATACGCAAGCTTCCTATTAGAAGAAGGTCTTCAAAAAGAAGCGCTGCCGCTTTTGAAAAAGGTT
CTTGAAATGGACGGAGCCAATGAAGAGCTTGAAGAAACGATTTTGCGAATCGAGGATGAATTTTCTAGATAA

Upstream 100 bases:

>100_bases
GCCGGGGGCATTCGTCTGAATTATGATAAGATTAACCCGAACAAATAAAGCTTTTTTTGTATGGTTGATGTTGTATAGGA
AAAGAAAGGACCGGTCCGAT

Downstream 100 bases:

>100_bases
GCAGGAATATTAACCATTCATGTGGAACATATAAGTATATAGATTATACGAACGATAGAGGAGGGAATTACATGCAGACC
CCTGTTTCTGTCAATGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLHDLYPNETELTNFYAELLIDI
DEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVSEQKLFQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKT
TAEEQSEIGGVNVHQRLAESLSASGEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSL
YMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALALDPGFVEALHTLLAVYHKEE
DYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKV
LEMDGANEELEETILRIEDEFSR

Sequences:

>Translated_423_residues
MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLHDLYPNETELTNFYAELLIDI
DEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVSEQKLFQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKT
TAEEQSEIGGVNVHQRLAESLSASGEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSL
YMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALALDPGFVEALHTLLAVYHKEE
DYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKV
LEMDGANEELEETILRIEDEFSR
>Mature_423_residues
MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLHDLYPNETELTNFYAELLIDI
DEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVSEQKLFQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKT
TAEEQSEIGGVNVHQRLAESLSASGEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSL
YMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALALDPGFVEALHTLLAVYHKEE
DYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKV
LEMDGANEELEETILRIEDEFSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPIA_BACSU (P54389)

Other databases:

- EMBL:   L47709
- EMBL:   AL009126
- PIR:   E69936
- RefSeq:   NP_390140.1
- ProteinModelPortal:   P54389
- SMR:   P54389
- EnsemblBacteria:   EBBACT00000001505
- GeneID:   939012
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22590
- NMPDR:   fig|224308.1.peg.2263
- GenoList:   BSU22590
- GeneTree:   EBGT00050000001349
- HOGENOM:   HBG697556
- OMA:   EHRTEEA
- ProtClustDB:   CLSK2752434
- BioCyc:   BSUB:BSU22590-MONOMER
- GO:   GO:0005488
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10
- SMART:   SM00028

Pfam domain/function: PF00515 TPR_1

EC number: NA

Molecular weight: Translated: 48321; Mature: 48321

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EQKLFQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAES
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LSASGEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSL
HHCCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHE
YMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALA
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
LDPGFVEALHTLLAVYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
QSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKVLEMDGANEELEETILRIEDE
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSR
CCC
>Mature Secondary Structure
MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVEKAISLISDLH
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EQKLFQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAES
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LSASGEFEDAIPWYEKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSL
HHCCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHE
YMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALA
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
LDPGFVEALHTLLAVYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEEAK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
QSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKVLEMDGANEELEETILRIEDE
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377