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The map label for this gene is ypoC

Identifier: 16079290

GI number: 16079290

Start: 2344264

End: 2344758

Strand: Reverse

Name: ypoC

Synonym: BSU22330

Alternate gene names: 16079290

Gene position: 2344758-2344264 (Counterclockwise)

Preceding gene: 16079291

Following gene: 16079287

Centisome position: 55.62

GC content: 43.03

Gene sequence:

>495_bases
ATGACGCAAGCAAAAGAAGTGTTGGCTTCCTATGAGCAATACTTGCGCAGTCTTGGCCAGAAGAGTTCCTCGGATATGAA
GAAAACCTTGCAGACCAATCCCGTGTATTTTGATTTCTGCACGGAATTACAAGGCGATTTGCCATGGGAGGACAGCGGGA
AATACGTTCCGCTTTTATTTGAAGTGTGGGATGACATCAAAGCATCACTTCTCCCAGTCTTTCAAACACGAAAATCGAGA
TGTGACCAAAACGAAATGTTAAAGGGCATTGTGTGTTTGCTGGCTTCGTTACATTGGACAGCAGGTGAGCCGGTGAAATC
GCTCGATTGGCAAGAACTGAGGGAGAAATCATATCCCGCAAAGCCGATTAATTGGGCTGAACGAGTGGAATTTATTCTTC
TTAAGCCGACCCAATACCATTGCTTTATTCAGCTTGATGAGCTGATTACCGAAATGAAAAAGCATTTTTATAAATATCAT
GCGATGAATCGATAA

Upstream 100 bases:

>100_bases
GATATCACTGTAAAGCCCAATCTCCGCGCTGTGCGGAGTGTCCGCTGCTTTCTTTGTGCAGAGAAGGGCAGAAGAGGGAT
AAAAAAGGACTGGTGAAACG

Downstream 100 bases:

>100_bases
AACCTCCTGTTAAAACGGGAGGTTTTTTATTGTGTACCAAAAAAGCCATCACCCCAAAGGTGACGGCTTTTTTGTTTAAT
TTGTTTTTTCAATGGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWEDSGKYVPLLFEVWDDIKASLLPVFQTRKSR
CDQNEMLKGIVCLLASLHWTAGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELITEMKKHFYKYH
AMNR

Sequences:

>Translated_164_residues
MTQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWEDSGKYVPLLFEVWDDIKASLLPVFQTRKSR
CDQNEMLKGIVCLLASLHWTAGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELITEMKKHFYKYH
AMNR
>Mature_163_residues
TQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWEDSGKYVPLLFEVWDDIKASLLPVFQTRKSRC
DQNEMLKGIVCLLASLHWTAGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELITEMKKHFYKYHA
MNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPOC_BACSU (P39789)

Other databases:

- EMBL:   U11289
- EMBL:   U11883
- EMBL:   L47709
- EMBL:   AL009126
- PIR:   I40526
- RefSeq:   NP_390114.1
- ProteinModelPortal:   P39789
- PhosSite:   P39789
- EnsemblBacteria:   EBBACT00000001240
- GeneID:   939041
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22330
- NMPDR:   fig|224308.1.peg.2237
- GenoList:   BSU22330
- GeneTree:   EBGT00050000003017
- HOGENOM:   HBG338131
- OMA:   ERVIEIP
- ProtClustDB:   CLSK873103
- BioCyc:   BSUB:BSU22330-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19346; Mature: 19215

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWEDSGKYVPLLF
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCHHHHH
EVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHWTAGEPVKSLDWQELREKSYPA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
KPINWAERVEFILLKPTQYHCFIQLDELITEMKKHFYKYHAMNR
CCCCHHHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWEDSGKYVPLLF
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCHHHHH
EVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHWTAGEPVKSLDWQELREKSYPA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
KPINWAERVEFILLKPTQYHCFIQLDELITEMKKHFYKYHAMNR
CCCCHHHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 7814321; 9384377