Click here to switch to the map view.

The map label for this gene is yppC

Identifier: 16079287

GI number: 16079287

Start: 2339799

End: 2340761

Strand: Reverse

Name: yppC

Synonym: BSU22300

Alternate gene names: 16079287

Gene position: 2340761-2339799 (Counterclockwise)

Preceding gene: 16079290

Following gene: 16079286

Centisome position: 55.53

GC content: 41.33

Gene sequence:

>963_bases
ATGAACGTGCAAGAACAACAGGCCATCAGAAAGCTTCTGAGCCGGATTGAGCGGCAGACAAAAATGAAAAACGCGGATAA
CATTTCAAGAACAAATGCTTATAAAGCATTTTACGACCGTCATCCGGAAATCAAATGGTCGCTTTTGGCTTCTTTCGTTT
CTCGTAATGCCGGCTGGTCAATGACTGACTTAAAAGGCAGTCTGTTTCAGCTTGGACTCCGTGAGAGACAGCAAAAATGG
TTCTTTTTAGCCTATGAAAGAGCGAACTGGCTTATTTTTTCGGATGCCTATCCGCAGCTTCTTTTATACCACTGGTCAAA
AAGAGTTGGGAAACCGCTGTTTCATCTGCTGCATGTGTTTGGCGTCTCACAATTTATGTCGGAAGAATGGACCCGTTTTT
GGCATGAGCGAAATACGGAGCGGCTAATGTATGCCCTCATTATAAATGAACAAAACACTATCCAAACACCTATTATACAA
AATCCTTCGTTTAAAAAGAATGTTTTTGACACGATTCCTTTTTATTTAAGTGACTGGTTTCATTTTAACACCGTTATTTT
TCCTTCCTCAAATGGGTTTTTTTACGGCATTTCAGTGAAACGCTTTTCAAAGGCGGAGGAAAGGATAAGGCTGGGAAAGC
AGCTGTCTCAATTGCTGTTCAAGCCAGAATTGTTCTCCTCTTTTTATCACTTTTTGCACACAGTGCCGCACACAGGTTCC
CGTTTTGATATGGAAAAGATGATCGGGATTACAAAAAGAACATCTCCTATGCTAAGGACATGCTACCCTGAGTTAATCCA
CTCATTAGACGGAACGAAAACAGATTGGTTTCATGGAAAGATAAAGAAAACGTTCTTTAGGCGCGAGGAATTGCCGAAGC
AGATTGAATTGACAGACTGGTATTTACATAAAAAGCGCCAGCTTCATGCGCTTTTTGCGGTGGAGCAGTGGCTGAAAAAA
TAA

Upstream 100 bases:

>100_bases
GTTTTGGGATGAAACCGAATGTTTCGGCTGAAATGTTTTTCCATTAGGATACCGAATCACTTTCTCATCCTCCTTATTAA
ACTAATCATGACGGAAGTGA

Downstream 100 bases:

>100_bases
AGAAGCAAGGAAATTCCTTGCTTCTTACGTAGAAGGGCGGTTCGGGCCGCCTAATTTTTTATCTAAAGAATCGATTGCCT
TTGATTCAGTCTTTTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNVQEQQAIRKLLSRIERQTKMKNADNISRTNAYKAFYDRHPEIKWSLLASFVSRNAGWSMTDLKGSLFQLGLRERQQKW
FFLAYERANWLIFSDAYPQLLLYHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINEQNTIQTPIIQ
NPSFKKNVFDTIPFYLSDWFHFNTVIFPSSNGFFYGISVKRFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGS
RFDMEKMIGITKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDWYLHKKRQLHALFAVEQWLKK

Sequences:

>Translated_320_residues
MNVQEQQAIRKLLSRIERQTKMKNADNISRTNAYKAFYDRHPEIKWSLLASFVSRNAGWSMTDLKGSLFQLGLRERQQKW
FFLAYERANWLIFSDAYPQLLLYHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINEQNTIQTPIIQ
NPSFKKNVFDTIPFYLSDWFHFNTVIFPSSNGFFYGISVKRFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGS
RFDMEKMIGITKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDWYLHKKRQLHALFAVEQWLKK
>Mature_320_residues
MNVQEQQAIRKLLSRIERQTKMKNADNISRTNAYKAFYDRHPEIKWSLLASFVSRNAGWSMTDLKGSLFQLGLRERQQKW
FFLAYERANWLIFSDAYPQLLLYHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINEQNTIQTPIIQ
NPSFKKNVFDTIPFYLSDWFHFNTVIFPSSNGFFYGISVKRFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGS
RFDMEKMIGITKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDWYLHKKRQLHALFAVEQWLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPPC_BACSU (P39791)

Other databases:

- EMBL:   L47838
- EMBL:   AL009126
- EMBL:   U11883
- PIR:   H69939
- RefSeq:   NP_390111.1
- EnsemblBacteria:   EBBACT00000003534
- GeneID:   939043
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22300
- NMPDR:   fig|224308.1.peg.2234
- GenoList:   BSU22300
- GeneTree:   EBGT00050000001926
- HOGENOM:   HBG339887
- OMA:   NKIQKPV
- ProtClustDB:   CLSK2752432
- BioCyc:   BSUB:BSU22300-MONOMER
- InterPro:   IPR019658

Pfam domain/function: PF10720 DUF2515

EC number: NA

Molecular weight: Translated: 38538; Mature: 38538

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQEQQAIRKLLSRIERQTKMKNADNISRTNAYKAFYDRHPEIKWSLLASFVSRNAGWS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
MTDLKGSLFQLGLRERQQKWFFLAYERANWLIFSDAYPQLLLYHWSKRVGKPLFHLLHVF
HHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHH
GVSQFMSEEWTRFWHERNTERLMYALIINEQNTIQTPIIQNPSFKKNVFDTIPFYLSDWF
HHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
HFNTVIFPSSNGFFYGISVKRFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGS
EEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
RFDMEKMIGITKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDW
CCCHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHH
YLHKKRQLHALFAVEQWLKK
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNVQEQQAIRKLLSRIERQTKMKNADNISRTNAYKAFYDRHPEIKWSLLASFVSRNAGWS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
MTDLKGSLFQLGLRERQQKWFFLAYERANWLIFSDAYPQLLLYHWSKRVGKPLFHLLHVF
HHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHH
GVSQFMSEEWTRFWHERNTERLMYALIINEQNTIQTPIIQNPSFKKNVFDTIPFYLSDWF
HHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
HFNTVIFPSSNGFFYGISVKRFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGS
EEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
RFDMEKMIGITKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDW
CCCHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHH
YLHKKRQLHALFAVEQWLKK
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 7814321