Click here to switch to the map view.

The map label for this gene is yomW

Identifier: 16079179

GI number: 16079179

Start: 2239083

End: 2239589

Strand: Direct

Name: yomW

Synonym: BSU21200

Alternate gene names: 16079179

Gene position: 2239083-2239589 (Clockwise)

Preceding gene: 16079178

Following gene: 16079180

Centisome position: 53.11

GC content: 35.11

Gene sequence:

>507_bases
ATGAGCATGACTGTTGAACAGATGACAAAAGTCTTCAGATTAGTTATGGATGATGTTGAACTGAATCGGCTCTTGTATTA
CAAAACTGATCCTCTCTCCCCTTCTCATCCAGATGTTCAATCACTCGAAAATTATTATGACTCCACAAATGACTCTCCCG
CTATAATCAATACCATATTCAAGCGAGCACCTAAAACAGATGATCTATCGGATTCACCATTATGTAGGATGTGTATTTAT
TTAGGGAATGCATTGCCTAAGCCGACAAACCAAAGCTTTATGTTGTTAAATCAAGAATTGATGATCGATGTATACACACA
CATTAATACATTTGAGATATCTGAGTATCGAAGTTTGAAAATCATCGACAGGGTTTCAAAATTATTTTTCAATAAAAATA
TTGCTGGTTTTGGTGTAACAGTAGATTATAAACGTTTGCTTATTAGTAATCCCCCTGACGGATATTTGGGCTACAAGATG
ATCTTTACTTTTGGAGCAAGTAAATGA

Upstream 100 bases:

>100_bases
TTGGCGAAGATTATCAAGTCGATGATATAGACTATTCTAAAGTTTATGGAGACCACGGAACAATAAAATTGGTTGCCAAA
AAGAAAGTTGGTGAAAAGAC

Downstream 100 bases:

>100_bases
ATGAGTTAAAGGATTTCTTTTTCTTAGGAAAACCGATCCAGACTGAAATAGGAGAGATTGATTTCATCCGCTTAAAAGAT
TATCCTCTCTACACCAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSMTVEQMTKVFRLVMDDVELNRLLYYKTDPLSPSHPDVQSLENYYDSTNDSPAIINTIFKRAPKTDDLSDSPLCRMCIY
LGNALPKPTNQSFMLLNQELMIDVYTHINTFEISEYRSLKIIDRVSKLFFNKNIAGFGVTVDYKRLLISNPPDGYLGYKM
IFTFGASK

Sequences:

>Translated_168_residues
MSMTVEQMTKVFRLVMDDVELNRLLYYKTDPLSPSHPDVQSLENYYDSTNDSPAIINTIFKRAPKTDDLSDSPLCRMCIY
LGNALPKPTNQSFMLLNQELMIDVYTHINTFEISEYRSLKIIDRVSKLFFNKNIAGFGVTVDYKRLLISNPPDGYLGYKM
IFTFGASK
>Mature_167_residues
SMTVEQMTKVFRLVMDDVELNRLLYYKTDPLSPSHPDVQSLENYYDSTNDSPAIINTIFKRAPKTDDLSDSPLCRMCIYL
GNALPKPTNQSFMLLNQELMIDVYTHINTFEISEYRSLKIIDRVSKLFFNKNIAGFGVTVDYKRLLISNPPDGYLGYKMI
FTFGASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMW_BACSU (O31961)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390003.1
- ProteinModelPortal:   O31961
- EnsemblBacteria:   EBBACT00000000629
- GeneID:   939150
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21200
- NMPDR:   fig|224308.1.peg.2126
- GenoList:   BSU21200
- ProtClustDB:   CLSK254617
- BioCyc:   BSUB:BSU21200-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19334; Mature: 19202

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTVEQMTKVFRLVMDDVELNRLLYYKTDPLSPSHPDVQSLENYYDSTNDSPAIINTIF
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
KRAPKTDDLSDSPLCRMCIYLGNALPKPTNQSFMLLNQELMIDVYTHINTFEISEYRSLK
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHEEHHHHCCCEEECCCHHHHH
IIDRVSKLFFNKNIAGFGVTVDYKRLLISNPPDGYLGYKMIFTFGASK
HHHHHHHHHHCCCCCCCEEEEHHHHHEECCCCCCCHHHEEEEEECCCC
>Mature Secondary Structure 
SMTVEQMTKVFRLVMDDVELNRLLYYKTDPLSPSHPDVQSLENYYDSTNDSPAIINTIF
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
KRAPKTDDLSDSPLCRMCIYLGNALPKPTNQSFMLLNQELMIDVYTHINTFEISEYRSLK
HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHEEHHHHCCCEEECCCHHHHH
IIDRVSKLFFNKNIAGFGVTVDYKRLLISNPPDGYLGYKMIFTFGASK
HHHHHHHHHHCCCCCCCEEEEHHHHHEECCCCCCCHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377