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The map label for this gene is yomX

Identifier: 16079178

GI number: 16079178

Start: 2238436

End: 2239086

Strand: Direct

Name: yomX

Synonym: BSU21190

Alternate gene names: 16079178

Gene position: 2238436-2239086 (Clockwise)

Preceding gene: 16079177

Following gene: 16079179

Centisome position: 53.1

GC content: 35.64

Gene sequence:

>651_bases
ATGAAGGACTACAGTAATTACCACAAGGTTAACATTAATAATAAACTTCTTCATGATGGTAAGCTTATTTTCCAACAAGG
CCTTAAGGGGTTTGAATCTGAAAAAGTCACAATTGATGGAATCGAAAAAACAGTAATGATCACTTCTAAGTACTCTAGTG
GCGATGGTTCTGCAAGATATATATTAGGTGAAATTGCTGACATTTATCGTGGCGGAGTTGTTAAGTTTAATGATGAAACA
TGGCTCATCACCTCCCACCCTCTCAGTAATAAGATTTACAAAAAGGCTGAGATAAAAATATGTGGAACATCATTTTTTCT
TACTTCAGAAGACAAGCTAATCGATACTGGCAAAATTAACGAAATCACTGGTAAGCCAATTTATGAAAAAGTACCTGGCG
AAAAAACTGAAGTCCCCTGCATATTCGAAAGGACAACTTCAATAAATGGCACTGAATTGGCGGTAAATCTTCCTGATGGT
CAAGCAAACATTACAATTCCTTATCTTGTTCATGAAAAATTGAAAATCGGACTTACCCTCACCTTCTTTGGCGAAGATTA
TCAAGTCGATGATATAGACTATTCTAAAGTTTATGGAGACCACGGAACAATAAAATTGGTTGCCAAAAAGAAAGTTGGTG
AAAAGACATGA

Upstream 100 bases:

>100_bases
CTAAGTGATCCTGAACTCACAGAAATCAGGGACACTATTTTAACAGTAAGTGGTGAATTAAGCAGACTTAGGGATAACTT
AGTAACAGACGGTGATTCGA

Downstream 100 bases:

>100_bases
GCATGACTGTTGAACAGATGACAAAAGTCTTCAGATTAGTTATGGATGATGTTGAACTGAATCGGCTCTTGTATTACAAA
ACTGATCCTCTCTCCCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKDYSNYHKVNINNKLLHDGKLIFQQGLKGFESEKVTIDGIEKTVMITSKYSSGDGSARYILGEIADIYRGGVVKFNDET
WLITSHPLSNKIYKKAEIKICGTSFFLTSEDKLIDTGKINEITGKPIYEKVPGEKTEVPCIFERTTSINGTELAVNLPDG
QANITIPYLVHEKLKIGLTLTFFGEDYQVDDIDYSKVYGDHGTIKLVAKKKVGEKT

Sequences:

>Translated_216_residues
MKDYSNYHKVNINNKLLHDGKLIFQQGLKGFESEKVTIDGIEKTVMITSKYSSGDGSARYILGEIADIYRGGVVKFNDET
WLITSHPLSNKIYKKAEIKICGTSFFLTSEDKLIDTGKINEITGKPIYEKVPGEKTEVPCIFERTTSINGTELAVNLPDG
QANITIPYLVHEKLKIGLTLTFFGEDYQVDDIDYSKVYGDHGTIKLVAKKKVGEKT
>Mature_216_residues
MKDYSNYHKVNINNKLLHDGKLIFQQGLKGFESEKVTIDGIEKTVMITSKYSSGDGSARYILGEIADIYRGGVVKFNDET
WLITSHPLSNKIYKKAEIKICGTSFFLTSEDKLIDTGKINEITGKPIYEKVPGEKTEVPCIFERTTSINGTELAVNLPDG
QANITIPYLVHEKLKIGLTLTFFGEDYQVDDIDYSKVYGDHGTIKLVAKKKVGEKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMX_BACSU (O31960)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390002.1
- ProteinModelPortal:   O31960
- EnsemblBacteria:   EBBACT00000002910
- GeneID:   939153
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21190
- NMPDR:   fig|224308.1.peg.2125
- GenoList:   BSU21190
- BioCyc:   BSUB:BSU21190-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24180; Mature: 24180

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDYSNYHKVNINNKLLHDGKLIFQQGLKGFESEKVTIDGIEKTVMITSKYSSGDGSARY
CCCCCCEEEEECCCEEEECCHHHHHHCCCCCCCCEEEEECCEEEEEEEEECCCCCCCEEE
ILGEIADIYRGGVVKFNDETWLITSHPLSNKIYKKAEIKICGTSFFLTSEDKLIDTGKIN
EHHHHHHHHCCCEEEECCCEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCEEECCCCC
EITGKPIYEKVPGEKTEVPCIFERTTSINGTELAVNLPDGQANITIPYLVHEKLKIGLTL
CCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECEEEEEEEE
TFFGEDYQVDDIDYSKVYGDHGTIKLVAKKKVGEKT
EEECCCEEECCCCHHHEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKDYSNYHKVNINNKLLHDGKLIFQQGLKGFESEKVTIDGIEKTVMITSKYSSGDGSARY
CCCCCCEEEEECCCEEEECCHHHHHHCCCCCCCCEEEEECCEEEEEEEEECCCCCCCEEE
ILGEIADIYRGGVVKFNDETWLITSHPLSNKIYKKAEIKICGTSFFLTSEDKLIDTGKIN
EHHHHHHHHCCCEEEECCCEEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCEEECCCCC
EITGKPIYEKVPGEKTEVPCIFERTTSINGTELAVNLPDGQANITIPYLVHEKLKIGLTL
CCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECEEEEEEEE
TFFGEDYQVDDIDYSKVYGDHGTIKLVAKKKVGEKT
EEECCCEEECCCCHHHEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377