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The map label for this gene is yomV

Identifier: 16079180

GI number: 16079180

Start: 2239586

End: 2240296

Strand: Direct

Name: yomV

Synonym: BSU21210

Alternate gene names: 16079180

Gene position: 2239586-2240296 (Clockwise)

Preceding gene: 16079179

Following gene: 16079181

Centisome position: 53.13

GC content: 34.6

Gene sequence:

>711_bases
ATGAATGAGTTAAAGGATTTCTTTTTCTTAGGAAAACCGATCCAGACTGAAATAGGAGAGATTGATTTCATCCGCTTAAA
AGATTATCCTCTCTACACCAAAGAACTAAGCATGTTGAGGATGAATAAGAAAAGTCTTATTAAAGAATATTCAAGGTTTA
ATGAGGATGGCTCGCTTGACCCATTTATTATTGAAATGAAAAAGAGAGATCTTTATGAAATTGTACATTCGGTACTCCCT
GATTTTCACGAGGCTTATTTCAAAGTTTTTTCAAAAGTATTGATAAACAAGGATTCCCTATCGTTGATTGGAAAACATAA
TTTTCCCCGTCTCCGAAAACTAATACTAGACATGCATTGTATCACTGAAGACAAGGTCGTTGACAATGATGAACTTCAGG
AGTTCCATGATATAAGTAAATCACTCAAGCAACAAGATTCTCAAAGTGATTTAAAGGATATAGTAAGCTGTGTTGCTGCA
TTTAACGGATACACGTATGAAGAAATATCTGAAATGACGATGTATCAACTATATTTGTCGTTCTACAGGATGGCTGAAGT
TATGAATTATAACACAACCACACTTTTTGCTACCGTCTCTCCTGATGTCAAAGTAAGTGATTGGAGTAGTCACATTAATC
TTTACAAGGAAGAGTCTTATCACCTGAGCACTAAAGATGCTAAAAATATCGAGCAATTATTTGGAGGCTAA

Upstream 100 bases:

>100_bases
CTGGTTTTGGTGTAACAGTAGATTATAAACGTTTGCTTATTAGTAATCCCCCTGACGGATATTTGGGCTACAAGATGATC
TTTACTTTTGGAGCAAGTAA

Downstream 100 bases:

>100_bases
TTAACTTTAGTCTCTTTTTATTTTTATTTAGGAGGAAACAATTTGGCAAAACAAACAGTAATCCATGAAGTTGGAAAAAT
TACAGCTAAACGTCTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLDPFIIEMKKRDLYEIVHSVLP
DFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHCITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAA
FNGYTYEEISEMTMYQLYLSFYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG

Sequences:

>Translated_236_residues
MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLDPFIIEMKKRDLYEIVHSVLP
DFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHCITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAA
FNGYTYEEISEMTMYQLYLSFYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG
>Mature_236_residues
MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLDPFIIEMKKRDLYEIVHSVLP
DFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHCITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAA
FNGYTYEEISEMTMYQLYLSFYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMV_BACSU (O31962)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390004.1
- ProteinModelPortal:   O31962
- EnsemblBacteria:   EBBACT00000003830
- GeneID:   939149
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21210
- NMPDR:   fig|224308.1.peg.2127
- GenoList:   BSU21210
- OMA:   YEEISEM
- ProtClustDB:   CLSK254618
- BioCyc:   BSUB:BSU21210-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27776; Mature: 27776

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLD
CCCHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PFIIEMKKRDLYEIVHSVLPDFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHC
CEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH
ITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAAFNGYTYEEISEMTMYQLYLS
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG
HHHHHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHCCCCEECCHHHHHHHHHHCC
>Mature Secondary Structure
MNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLD
CCCHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PFIIEMKKRDLYEIVHSVLPDFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHC
CEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH
ITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAAFNGYTYEEISEMTMYQLYLS
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG
HHHHHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHCCCCEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377