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The map label for this gene is yopQ

Identifier: 16079139

GI number: 16079139

Start: 2205193

End: 2206575

Strand: Reverse

Name: yopQ

Synonym: BSU20800

Alternate gene names: 16079139

Gene position: 2206575-2205193 (Counterclockwise)

Preceding gene: 16079140

Following gene: 255767466

Centisome position: 52.34

GC content: 32.39

Gene sequence:

>1383_bases
ATGACAGTGATCTTTGATCAGTCTGCAAATGAGAAACTGCTTTCAGAAATGAAAGATGCTATCTCGAAAAATAAACACAT
AAGATCTTTTATTAACGATATTCAATTAGAGATGGCTAAAAATAAAATTACTCCAGGGACAACACAAAAATTAATTTATG
ATATAGAAAATCCAGAAGTCGAAATTTCTAAAGAATATATGTACTTTTTAGCCAAGTCCCTATACTCAGTTCTTGAAAGT
GAAAGGTTTAATCCACGAAATTACTTCACAGAAACGGATATGAGAGAAATTGAAACGTTATGGGAAGGATCTGTGGAGGA
AGATATAAAATTTCCGTATACATTCAAACAAGTTGTAAAGTATTCGGATGATAATTATTTCTTCCCCATCACTGCTAAAG
AGTTGTTTATGCTATTTGAAAATAAGTTATTGCACTATAATCCTAATGCTCAAAGAACGAACAAAACGAAAAAACTAGAG
GGCTCAGATATTGAGATACCTGTACCGCAGCTCAATAAACAATCGGTTGAAGAAATAAAGGAACTGTTCTTAGATGGGAA
ATTAATTAAATCAGTTTTTACGTTTAATGCACGTGTTGGAAGCGCAAGTTGTGGCGAAGAATTAAAATATGATGACGACA
CTATGTCTCTTACAGTGACTGAAGACACCATTTTAGACGTTTTAGACGGGTATCACCGGCTAATAGGCATTACTATGGCT
ATAAGACAACATCCTGAGTTAGATCATTTGTTTGAAGAAACCTTTAAAGTGGACATCTATAACTACACTCAAAAAAGGGC
GAGAGAGCATTTTGGGCAACAAAACACAATAAACCCAGTTAAAAAATCTAAAGTGGCTGAGATGAGTCAAAATGTTTATT
CAAATAAAATTGTTAAGTTTATTCAGGACAATAGCATAATTGGTGATTATATAAAGACAAATGGAGACTGGATAAATCAG
AATCAAAACTTACTTATAACTTTTTCTGACTTCAAAAAGGCAATTGAAAGAAGCTATTCTAAAAAAGATTTTTCTACTCA
AGCAGACATCTTAAAAACTGCAAGATACCTTACATCTTTCTTTGATGCTTTAGCTACACAATATGTAGATGAGTTCTTAG
GTGATATAGCAAAAGAACGGAAGAGAAGTTTTGTAAACAACTATTTGTTCTTTAATGGTTATGTGGGATTAGCTAAGAAA
TTGCAATTAGATGGGGTAAGCCTAGACGAGTTGGAAAGTAAGATTACTGATGTTTTAGGCTCTATAGATTTTAGTAAGAA
AAATAAGTTGTGGGATGAATTAGGTGTAGTAGACAAGAATGGAAATGCTAAATCACCACAAAAGATATGGAATTTCTTCA
ATAATTTAAAAATAGACGAGTAA

Upstream 100 bases:

>100_bases
TTTCGGTATATTACTCAGTTCAAATGATAATTCTTCTTGATTAACCAGATTGCCTTTGGTAACTTTAAATTTAGCAACAT
GACATGAGGTGAAAGGCTAT

Downstream 100 bases:

>100_bases
TTACTTAGGAGTTGTTTGTTGCAATGTTCAATAGTGAGATTAAGGAAAAATATTTAGATACCTTATCTGAGGGTATGGTT
ATGCAGATGAGGCCTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MTVIFDQSANEKLLSEMKDAISKNKHIRSFINDIQLEMAKNKITPGTTQKLIYDIENPEVEISKEYMYFLAKSLYSVLES
ERFNPRNYFTETDMREIETLWEGSVEEDIKFPYTFKQVVKYSDDNYFFPITAKELFMLFENKLLHYNPNAQRTNKTKKLE
GSDIEIPVPQLNKQSVEEIKELFLDGKLIKSVFTFNARVGSASCGEELKYDDDTMSLTVTEDTILDVLDGYHRLIGITMA
IRQHPELDHLFEETFKVDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKFIQDNSIIGDYIKTNGDWINQ
NQNLLITFSDFKKAIERSYSKKDFSTQADILKTARYLTSFFDALATQYVDEFLGDIAKERKRSFVNNYLFFNGYVGLAKK
LQLDGVSLDELESKITDVLGSIDFSKKNKLWDELGVVDKNGNAKSPQKIWNFFNNLKIDE

Sequences:

>Translated_460_residues
MTVIFDQSANEKLLSEMKDAISKNKHIRSFINDIQLEMAKNKITPGTTQKLIYDIENPEVEISKEYMYFLAKSLYSVLES
ERFNPRNYFTETDMREIETLWEGSVEEDIKFPYTFKQVVKYSDDNYFFPITAKELFMLFENKLLHYNPNAQRTNKTKKLE
GSDIEIPVPQLNKQSVEEIKELFLDGKLIKSVFTFNARVGSASCGEELKYDDDTMSLTVTEDTILDVLDGYHRLIGITMA
IRQHPELDHLFEETFKVDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKFIQDNSIIGDYIKTNGDWINQ
NQNLLITFSDFKKAIERSYSKKDFSTQADILKTARYLTSFFDALATQYVDEFLGDIAKERKRSFVNNYLFFNGYVGLAKK
LQLDGVSLDELESKITDVLGSIDFSKKNKLWDELGVVDKNGNAKSPQKIWNFFNNLKIDE
>Mature_459_residues
TVIFDQSANEKLLSEMKDAISKNKHIRSFINDIQLEMAKNKITPGTTQKLIYDIENPEVEISKEYMYFLAKSLYSVLESE
RFNPRNYFTETDMREIETLWEGSVEEDIKFPYTFKQVVKYSDDNYFFPITAKELFMLFENKLLHYNPNAQRTNKTKKLEG
SDIEIPVPQLNKQSVEEIKELFLDGKLIKSVFTFNARVGSASCGEELKYDDDTMSLTVTEDTILDVLDGYHRLIGITMAI
RQHPELDHLFEETFKVDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKFIQDNSIIGDYIKTNGDWINQN
QNLLITFSDFKKAIERSYSKKDFSTQADILKTARYLTSFFDALATQYVDEFLGDIAKERKRSFVNNYLFFNGYVGLAKKL
QLDGVSLDELESKITDVLGSIDFSKKNKLWDELGVVDKNGNAKSPQKIWNFFNNLKIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPQ_BACSU (O34448)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389962.1
- ProteinModelPortal:   O34448
- EnsemblBacteria:   EBBACT00000002800
- GeneID:   936481
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20800
- NMPDR:   fig|224308.1.peg.2085
- GenoList:   BSU20800
- OMA:   NINERNV
- ProtClustDB:   CLSK626564
- BioCyc:   BSUB:BSU20800-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53504; Mature: 53373

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIFDQSANEKLLSEMKDAISKNKHIRSFINDIQLEMAKNKITPGTTQKLIYDIENPEV
CEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCE
EISKEYMYFLAKSLYSVLESERFNPRNYFTETDMREIETLWEGSVEEDIKFPYTFKQVVK
EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHH
YSDDNYFFPITAKELFMLFENKLLHYNPNAQRTNKTKKLEGSDIEIPVPQLNKQSVEEIK
HCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ELFLDGKLIKSVFTFNARVGSASCGEELKYDDDTMSLTVTEDTILDVLDGYHRLIGITMA
HHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
IRQHPELDHLFEETFKVDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQDNSIIGDYIKTNGDWINQNQNLLITFSDFKKAIERSYSKKDFSTQADILKTARYLTSF
HHCCCEEHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FDALATQYVDEFLGDIAKERKRSFVNNYLFFNGYVGLAKKLQLDGVSLDELESKITDVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHEECCCCHHHHHHHHHHHHH
SIDFSKKNKLWDELGVVDKNGNAKSPQKIWNFFNNLKIDE
CCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVIFDQSANEKLLSEMKDAISKNKHIRSFINDIQLEMAKNKITPGTTQKLIYDIENPEV
EEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCE
EISKEYMYFLAKSLYSVLESERFNPRNYFTETDMREIETLWEGSVEEDIKFPYTFKQVVK
EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHH
YSDDNYFFPITAKELFMLFENKLLHYNPNAQRTNKTKKLEGSDIEIPVPQLNKQSVEEIK
HCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ELFLDGKLIKSVFTFNARVGSASCGEELKYDDDTMSLTVTEDTILDVLDGYHRLIGITMA
HHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
IRQHPELDHLFEETFKVDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQDNSIIGDYIKTNGDWINQNQNLLITFSDFKKAIERSYSKKDFSTQADILKTARYLTSF
HHCCCEEHHHHHCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FDALATQYVDEFLGDIAKERKRSFVNNYLFFNGYVGLAKKLQLDGVSLDELESKITDVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHEECCCCHHHHHHHHHHHHH
SIDFSKKNKLWDELGVVDKNGNAKSPQKIWNFFNNLKIDE
CCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377